Microbacterium aurantiacum: A8L33_05720
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Entry
A8L33_05720 CDS
T04340
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcw
Microbacterium aurantiacum
Pathway
mcw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A8L33_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcw03021
]
A8L33_05720
03400 DNA repair and recombination proteins [BR:
mcw03400
]
A8L33_05720
Enzymes [BR:
mcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A8L33_05720
Transcription machinery [BR:
mcw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A8L33_05720
DNA repair and recombination proteins [BR:
mcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A8L33_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YlqD
ADIP
Motif
Other DBs
NCBI-ProteinID:
ANG84944
UniProt:
A0A0M8MR52
LinkDB
All DBs
Position
1177471..1181346
Genome browser
AA seq
1291 aa
AA seq
DB search
MLESTTFDQLRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHRDLATQENNIRLELKTLADRRDARVAARLQKLEDE
LAALEAEGAKADQKKKVKDAAEKEMTSIRKNADDQIARLERVWEEFRTLEVGSLKGEDEI
FHELQDRFGQYFEAHMGAESIKRRLETFDLQAEADSLHLQISEGKGQRKIRAIKRLKVVN
SFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGATGEGR
VFGSVSEAILAKDEGTLDLQAKVRIRVPGLTFLEGDAPEGYERHGLLDASLGQAIFNDAL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAATLDRIKDAGFYWATRSGVTVALSDIL
TPPNKAEIVAGYEKQAAKVQGQFEKGLTTDAERRQELIKIWTAATDEVQKAMRANFPEDN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTTKGLELPIAAPGADGELIKDANVE
NSVFARTLSADVVNPAGEVVAEAGDDVGDVLINRLVESGVESIKVRSVLTCDSAVGVCAK
CYGRSLATGKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIDETDKSKKVILTPDNGDEPHVYPVLKRATLLVEDGQHVTV
GQPLQVGTLDPKEVMRVMGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTTLLPGELVDFKRYQQINREAVGEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVTVEATEEAKSERYPNRI
FASDGAYSDADLSYVDFDSFSTDDFTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaatcaactactttcgatcagcttcgcatcggcctggccaccgctgacgacatc
cgtcgttggtccttcggcgaggtcaagaagcccgagaccatcaactaccgcacgctgaag
ccggagaaggacggcctcttcggcgagcagatcttcggaccctcccgcgactgggagtgc
gcttgcggaaagtacaagcgcgtccgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgccgcgagcgcatgggccacatcgagctcgccgcgccc
gtcacccacatctggtacttcaagggcgtgccctcgcgcctcgggtacctgctggacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatggtcatctccgtcgac
gaggatgcgcgtcaccgcgacctcgccacgcaggagaacaacatccgtctcgagctgaag
acgctcgccgaccgccgcgacgcccgcgtcgccgcgcgcctgcagaagctggaggacgag
ctcgccgccctggaggcggagggtgccaaggccgaccagaagaagaaggtcaaggacgcc
gctgagaaggagatgacgtcgatccgcaagaacgcggacgaccagatcgcccgtctcgag
cgcgtgtgggaggagttccgcacgctcgaggtcggctcgctcaagggcgaggacgagatc
ttccacgagctgcaggaccgcttcggtcagtacttcgaggcccacatgggtgcggagtcg
atcaagcgtcgcctggagaccttcgacctgcaggccgaggccgacagcctccacctgcag
atctccgagggcaagggtcagcgcaagatccgcgcgatcaagcgcctgaaggtcgtcaac
tcgttcctgcagaccggcatgagcccggcatccatggtcctggacgtcgtcccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgaccagcgacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgtcttcgtcgtctgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccggcgcgggcgccccgtcaccggtaccggcaaccgcgccctcaag
tccctgagcgacatgctcaagggaaagcagggtcgcttccgccagaacctgctcggaaag
cgcgtggactactcgggccgttcggtcatcgtcgtcggtccccagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctcttcaagccgttcgtcatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggctgccaagcgcgccgtcgagcgcacgcgc
cccgaggtctgggacgtgctcgaggagatcatccgcgagcgtccggttctgctgaaccgt
gcgcccacgctccaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtctgcgcggcgttcaacgccgacttcgacggtgaccag
atggccgtccacctgccgctgtccgtcgaggcccaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtccgacggccggccggtcaccctgccctcgcaggac
atgatcatcggcctgcaccacctgaccacggtcaaggagggtgcgaccggtgagggccgc
gtgttcggttcggtctccgaggcgatcctggccaaggacgagggcaccctcgacctgcag
gccaaggtccgcatccgcgttccgggtctcaccttcctcgagggcgacgcccccgagggc
tacgagcgccacggtctcctggacgcctcgctcggccaggcgatcttcaacgacgcgctg
cccaagggctacccgttcgtccgtgagcaggccgacaagggcaagctcagccagatcgtc
aacaagctggccgaggagtaccccaaggtcgaggtcgcggcgacgctggaccgcatcaag
gacgccggcttctactgggccacccgttcgggtgtcacggtggcgctgagcgacatcctg
accccgccgaacaaggcggagatcgtcgcgggctacgagaagcaggccgcgaaggtccag
ggccagttcgagaagggtctcaccaccgacgccgagcgtcgtcaggagctcatcaagatc
tggaccgccgccaccgacgaggtccagaaggcgatgcgcgccaacttccccgaggacaac
accatcaaccgcatggtgtcctccggtgcgcgtggtaactggctgcagatccggaacatc
gccggtatgcgaggcctggtgaacaaccccaagggtgagatcatccctcgcccgatcatc
tcctcgtaccgcgagggtctgtcggtcgcggagtacttcatcgccacccacggtgcccgc
aagggtctggccgacaccgccctccgtaccgccgactcgggctacctgacccgtcgtctg
gtggacgtctcgcaggatgtcatcatccgcgaagaggactgcggcacgaccaagggtctc
gagctgccgatcgcggcgcccggtgccgacggcgagctcatcaaggacgccaacgtcgag
aactcggtgttcgcgcggaccctgtcggcggatgtcgtcaaccccgcgggcgaggtcgtc
gccgaagccggtgacgacgtcggcgacgtgctgatcaaccgtctggtggagtcgggtgtc
gagagcatcaaggtgcgctcggtcctcacctgcgactcggccgtcggcgtctgcgcgaag
tgctacggccgttcgctggccaccggcaagatcgtcgacatcggcgaggccgtcggcatc
atcgccgcccagtcgatcggtgagcccggtacccagctgacgatgcgtaccttccacacc
ggtggttcggcatccgcggatgacatcacgcagggtcttccccgtgtgcaggagctgttc
gaggcgcgtacccccaagggcgcatcgccgatcgccgaggccgacggccgcatcacgatc
gacgagaccgacaagagcaagaaggtcatcctcacgcccgacaacggcgacgagccgcac
gtgtaccccgtgctcaagcgcgcgacgctgctggtcgaggacggccagcacgtcacggtc
ggccagcccctgcaggtcggcacgctcgaccccaaggaggtcatgcgtgtcatgggtgcc
cgcgaggtgcagaagtacctcgtcggcggcgtgcagggcgtctaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcggaaggtcaccgtg
gtcgaccacggtgacacgacgctgcttccgggtgagctggtggacttcaagcgctaccag
cagatcaaccgcgaggccgtcggcgagggcaagcgccccgcgtcgggtcgtccggagctg
atgggtatcaccaaggcgtcgctcgcgacggagtcgtggctgtcggccgcctccttccag
gagacgacccgcgtgctcacccaggcggcgatggagggcaagagcgaccctctggtcggc
ctcaaggagaacgtcatcatcggaaagctcatccccgccggaaccggacttgcgaagtac
cgcaacgtcacggtcgaggcgacggaggaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcgtacagcgacgccgacctgagctacgtcgacttcgacagcttc
tccacggacgacttcaccccgggcacctacaactga
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