Microbacterium aurantiacum: A8L33_07615
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Entry
A8L33_07615 CDS
T04340
Name
(GenBank) cold-shock protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mcw
Microbacterium aurantiacum
Pathway
mcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8L33_07615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcw03019
]
A8L33_07615
03009 Ribosome biogenesis [BR:
mcw03009
]
A8L33_07615
Enzymes [BR:
mcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A8L33_07615
Messenger RNA biogenesis [BR:
mcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8L33_07615
Ribosome biogenesis [BR:
mcw03009
]
Prokaryotic type
rRNA helicases
A8L33_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Transketolase_C
CMS1
MoaF_like
DDE_1
Maf_flag10_N
Motif
Other DBs
NCBI-ProteinID:
ANG85267
LinkDB
All DBs
Position
complement(1594008..1595840)
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AA seq
610 aa
AA seq
DB search
MTETQPSPDSDPQIEAEAPQEPASPTFADLGLGDAVLEALRGVGYEPPSAIQAATIPPLL
AGRDVVGLAQTGTGKTAAFALPVIDRLDLTQKTPQALVLAPTRELALQVCEAFEKYASHL
DGVHVLPVYGGQGYGVQLSALRRGVHIVVGTPGRIIDHLEKGTLDLSELRYLVLDEADEM
LKMGFAEDVETILADTPKTKQVALFSATMPASIRRMSQQYLNDPAEITVKTKTTTSATIS
QRYLMVSWQQKMDALTRILEVENFDGMIVFGRTRSVTEEIAEKLRARGYSAAAINGDVAQ
PMREKTVNQLKSGALDVLVATDVAARGLDVERISHVVNFDIPTDTESYVHRIGRTGRAGR
TGDAISFVTPRERWLVKAIEKATRQEVTEMSLPSVDEVNETRLTRFDDRITAALAETERV
DRFRDIIAHYVRNHDVPEVDVAAALAIVAQGETPLLLEPDPEPSVRPARAARDGERPGTA
RDRGTDRDRGGERGDRGDRGPRKAPRGGFAMYRIAVGKRHRVEPRQIVGALANEGGLRRD
DFGAIQIRPDFSLVELPSPLPAGTLERLSDTRISGRLIELRPDPGGPRRRDGDRDDDARG
RKPRHGSSRD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaacacagccttcgcccgattccgacccccagatcgaggccgaggctccgcag
gagcccgcctcgccgaccttcgccgacctcggtctcggagacgcggtgctggaagcgctc
cgcggcgtcggatacgaacccccctccgccatccaggccgccacgatcccgccgctgctg
gccggccgcgacgtggtgggcctcgcccagaccggcaccggcaagaccgccgcgttcgcc
ctgccggtcatcgatcgtctcgatctgacccagaagacgccgcaggccctcgtgctcgcg
ccgacccgcgaactcgccctccaggtctgcgaggcgttcgagaagtacgcctcgcacctc
gacggcgtgcacgtcctccccgtctacggagggcaaggctacggggtgcagctgtcggcc
ctccgccgcggcgtgcacatcgtcgtcggcacccccggacgcatcatcgaccacctcgag
aagggcacgctcgatctctccgagctgcgctacctcgtgctcgacgaggccgacgagatg
ctgaagatgggcttcgcggaggacgtcgagacgatcctcgccgacacgcccaagaccaag
caggtcgcccttttctcggcaacgatgccggcatccatccgacggatgtcgcagcagtac
ctgaacgatcccgccgagatcacggtcaagaccaagacgaccacctcggcgacgatcagc
cagcgctacctcatggtctcgtggcagcagaagatggatgccctgacccgcatcctcgag
gtcgagaacttcgacggcatgatcgtcttcggccgcacgcgcagtgtgaccgaggagatc
gccgagaagctccgcgcccgcggatactccgccgccgccatcaacggcgacgtcgcgcag
ccgatgcgcgagaagacggtgaaccagctgaagtccggcgcgctcgacgtgctcgtggcc
accgatgtcgccgcccgcgggctcgacgtcgagcggatctcccacgtcgtgaacttcgac
atccccaccgacaccgagtcgtacgtgcaccgcatcggacgcaccggtcgtgcgggtcgt
accggcgacgccatcagcttcgtcacgccgcgcgagcgttggctcgtcaaggccatcgag
aaggccacgcggcaggaggtgaccgagatgtcgctgccgagcgtggacgaggtcaacgag
acccgcctcactcggttcgacgaccgaatcacggccgcgctcgccgagacggagcgcgtg
gaccgcttccgtgacatcatcgcccactacgtgcgcaaccacgatgtgcccgaggtcgat
gtcgcggccgcgctcgcgatcgtcgcgcagggagagaccccgctgctgctcgagcccgat
cccgagccctccgtgcgtcctgcccgcgcggcgcgcgacggcgagcgcccggggactgca
cgtgaccgcggcacggaccgggaccgcggcggcgagcgcggcgaccgcggcgaccgcggc
ccgcgcaaggcgccccgcggcgggttcgccatgtaccgcatcgcggtcggcaagcgccac
cgtgtcgagccccgtcagatcgtcggcgcgctcgcgaacgagggagggctgcgtcgcgac
gacttcggtgcgatccagatccgccccgacttctcgctcgtcgagctgccgtcgcccctg
cccgccggcaccctggagcgcctcagcgacacccgcatctcgggtcgactgatcgagctg
cgccccgaccccgggggcccccgccgacgcgacggcgaccgcgacgacgatgcgcgcggc
cggaagccccgccacggcagctcccgcgactga
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