Microbacterium aurantiacum: A8L33_08010
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Entry
A8L33_08010 CDS
T04340
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcw
Microbacterium aurantiacum
Pathway
mcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8L33_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcw03021
]
A8L33_08010
03019 Messenger RNA biogenesis [BR:
mcw03019
]
A8L33_08010
Transcription machinery [BR:
mcw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A8L33_08010
Messenger RNA biogenesis [BR:
mcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A8L33_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
PIP5K
Motif
Other DBs
NCBI-ProteinID:
ANG85335
UniProt:
A0A0M8MNE9
LinkDB
All DBs
Position
1692737..1694986
Genome browser
AA seq
749 aa
AA seq
DB search
MESISEIHTDVQADERAEAPENVETVETTDDTAAATSVDDADEAPAADEAPAADAEAPAE
APVDAADDAEAAAPAAEAAPAEAVAPTEDAAPAEAAAPAEEAPAKAPRKRAPRRAKTGDA
PVRKTAAKKNATDEAEVSAETPAEDAPADAAGSDAGTTAEVAPTEDAAPAAGEAPASTEA
GESQPAAEAAEPAAEAPKAPRGRGRGSRAKKTAVEEAPAAEAVEPAADSAAEPASDASDS
TPAADATDGAAEGGRSEGDRSDGDRSEGDRSDGDETSGRGRGRSRNRNRNRNSGGQNAQN
GQNQGGNAPAGNTGPAAQNASDDDGEPGGNGRGRQRNKRRGAQNADEFDTEIGEDDVLIP
IAGILDVLDNYAFVRTTGYLPGPQDVYVSLGQVKKYHLRKGDAVVGAIKQPREGEQSGRQ
KYNALVKVDAVNGLSVDDAAGRVEFGNLTPLYPQDRLRLETAPEKLTQRIIDLVAPIGKG
QRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIAST
FDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGRVLTGGVDA
SALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLAD
KRIFPAVDVNASSTRREEMLLSADEVKITWKLRRALAGLDPQQALEVVLGKLKETQSNVE
FLVQMQKSIPAPTGSHAGGHSHGHDNSIR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccacaccgacgtccaggccgacgagcgcgctgaggcgccc
gagaacgtcgagaccgtcgagaccaccgacgacaccgctgcggcgacatccgtcgacgac
gccgacgaggcgcctgccgccgacgaggcgccggctgccgacgccgaggcgccggcggag
gcacccgtcgacgccgccgacgacgcggaggctgccgctccggccgccgaagccgcgccc
gccgaggccgtcgccccgaccgaggacgccgcgcccgccgaggccgccgcccccgccgag
gaggcgcccgccaaggcaccccgcaagcgcgcaccgcgtcgcgcgaagaccggcgacgcc
ccggtccgcaagacggcggccaagaagaacgcgaccgacgaggcggaggtctccgccgag
acgcccgccgaggacgcgcccgcggatgccgccggctcggacgccggcaccaccgccgag
gtcgcaccgaccgaggacgccgcccccgcagcgggcgaggcgcccgcctcgaccgaggcc
ggagagtcccagcccgccgccgaggccgcggagcccgccgccgaggcgcccaaggccccg
cggggtcgcggtcgcggctcccgcgcgaagaagaccgccgtcgaggaggcacctgccgcc
gaggccgtcgagcccgcggccgactccgccgccgaaccggcatccgacgcttcggactcc
acgcccgccgccgacgcgacggacggggccgccgagggcggtcggtccgagggcgaccgg
tccgacggtgatcgctccgagggcgaccgctccgacggcgacgagacctccggccgtggc
cgcggccgcagccggaaccggaaccggaaccgcaactccggcggccagaacgcgcagaac
ggccagaaccagggcggcaacgcccccgccggcaacaccggcccggccgcgcagaacgcc
tccgacgacgacggcgagcccggtgggaacggccgcggccgtcagcgcaacaagcgtcgc
ggtgcgcagaacgccgatgagttcgacaccgagatcggcgaggacgacgtcctcatcccg
atcgccggcatcctggacgtcctcgacaactacgccttcgtccgcaccacggggtacctc
cccggtccgcaggacgtctacgtctcgctcggtcaggtcaagaagtaccacctgcgcaag
ggcgacgccgtcgtgggtgcgatcaagcagccgcgcgagggcgagcagtccggccgtcag
aagtacaacgcgctggtcaaggtcgacgccgtcaacggtctgtccgtggacgacgccgcc
ggccgtgtggagttcggcaacctgacgccgctgtacccgcaggaccgcctgcgcttggag
acggcgcccgagaagctgacccagcggatcatcgatctggtcgccccgatcgggaagggc
cagcgcggtctcatcgtcgcgccgcccaaggccgggaagaccatcgtgctccagcagatc
gccaacgcgatcgcgacgaacaatcccgaggtgcacctgatggtcgtcctcgtggacgag
cgtcccgaagaggtcaccgacatgcagcggaccgtgaagggcgaggtcatcgcctcgacc
ttcgaccgtcccgccgaggaccacacgaccgtcgccgaactcgccatcgagcgtgcgaag
cgcctcgtggagctcggtcgcgatgtcgtcgtgctgctcgactcgatcacccgcctcggg
cgtgcgtacaacatctcggcgccgacgtcgggtcgcgtgctcaccggcggtgtcgacgcc
tcggcgctgtacccgcccaagcgcttcttcggcgcggcgcgcaacatcgagaacggcgga
tcgctcacgatcctcgccacggcgctcgtggagaccgggtccaagatggacgaggtcatc
ttcgaggagttcaagggaaccggcaacagcgagctgcgtctgtcgcgtcagctcgccgac
aagcggatcttccccgcggtcgacgtcaacgcctccagcacgcgtcgcgaagagatgctg
ctctcggcggacgaagtcaagatcacctggaagctccgccgcgcgctggcgggcctggac
ccccagcaggcgctggaggtcgtgctcggcaagctgaaggagacgcagtccaacgtcgag
ttcctcgtgcagatgcagaagtcgatcccggcgcccaccggctcccacgccggcggtcac
agccacggtcacgacaacagcatccgctga
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