Microbacterium chocolatum: A8L33_11995
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Entry
A8L33_11995 CDS
T04340
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcw
Microbacterium chocolatum
Pathway
mcw03420
Nucleotide excision repair
mcw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A8L33_11995
03430 Mismatch repair
A8L33_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcw03400
]
A8L33_11995
Enzymes [BR:
mcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8L33_11995
DNA repair and recombination proteins [BR:
mcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A8L33_11995
MMR (mismatch excision repair)
Other MMR factors
A8L33_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ANG86772
UniProt:
A0A0M9VKU9
LinkDB
All DBs
Position
complement(2518410..2521727)
Genome browser
AA seq
1105 aa
AA seq
DB search
MSSPRLSAHTIAAALGQFPPTAEQTAVIESGLAPALVVAGAGSGKTETMASRVVWLVANG
IVSRDEILGLTFTRKAAGELAERIQRRLARLAEFERLGLLPHLAALHRDGHLDVFGTIER
SSGDRQALRDAHLATLVDATGAVPRELEGDTLLHRPSVATYNSFADQIVREHAVRVGRDP
DAAVLSESAAWLLMRRVVLASDDPRLETRGEALRTIVDAALRIARDRVDNLVSWEDLARF
PERFRDVLERPSVSRGVTVYADVASSVERVEALALLAGLARDYDEAKRRRGLIDFSDQVA
GAFEAVSRHPEVGEQMRSRYRVVLLDEYQDTSVVQTDLLAALFADTAVMAVGDPHQAIYG
WRGASAGNLGGFAGAFARHTACQSFALMTSWRNAGRVLVAANAVLAPLTDSAPVDVPPLR
TRPDAPEGDVDVVFEPDIDTESDRVAEWFDRVRGERAAEGRATTGAVLFRNKKHMVRFAD
ALGRRGIPHRILGLGGLLSTPEVVDVVAVLRVLSDPDAGSALLRLLSGPRWSIGLPDLRA
LRDLATRLSRHDAALTPLPPAVIETLRSSASDDGVSLIDALDFVARQPVTHGWLSDFSEE
GRVRLKDAGLTFGGLRRAVGAPIGELVRLIEAELRLDIELAANETRGPARIASAQLRAFV
DEVHAFLDADDTGTVASLLAWLDHAERQDDLAPRTEPPEEDVVQLLTIHGSKGLEWDAVA
VVRLVTDELPGAARDTRGWLGFGVLPYEFRGDRRWLPDLAWEAERAATQQDLRDNFADFV
LAHRTRQLEEDRRLAYVAVTRARDHLLLSGATWSGTRKPRARSVFLDEMCTALRRDVPAA
EETDDPYDGERRTLRWPLDPLGARRTAVTRAADAVGAVRAEDVTPEDDILLLLQERDART
SAREVRAPTRIAASRYKEFLADYQGAIGRIARPLPERPYRETRLGTLFHSWVEERSGLIG
RRSVWDEALWEVDDETLHDVEQTAASTDDAARLARLQAAFLASEWAGLRPIEVECEIDFT
DTELDGTPRVIVCRIDAVYRRDDRGGRIEIVDWKTGRAPRTESERQDRLVQLELYRRAYH
AARGIPLGEIDVALFYVADDLVLRA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
gtgagctccccgcgactgtccgcgcacacgatcgcggccgccctcggtcagttcccgccg
acggcggagcagaccgccgtcatcgagtcaggactcgccccggccctcgtggtcgccggc
gcgggcagcgggaagaccgagaccatggcctctcgggtcgtgtggctcgtcgccaacggc
atcgtctcgcgcgacgagatcctcgggctcaccttcacgcggaaggccgccggtgaactc
gccgagcgcatccaacggcgtctggcccgcctggccgagttcgagcggctcggcctcctc
ccgcacctcgcggcgcttcatcgggacggccacctcgacgtcttcgggaccatcgagagg
tcctcgggcgaccgacaggcattgcgagacgctcacctcgcgacgctggtagacgcgacc
ggggcggtgccgcgcgagctcgagggcgacaccctcctgcaccggcccagcgtggccacc
tataacagcttcgcggatcagatcgtgcgcgagcacgcggtgcgagtgggtcgtgatccc
gacgccgcggtgctgtcggagtccgccgcctggctcctcatgcggcgcgtcgtgctcgcc
tcggacgacccgagactcgagacgagaggggaggcgctgcgcaccatcgtcgacgccgcg
ctgcggatcgcgcgggacagagtggacaacctcgtctcctgggaggacctggcccggttc
cccgagcggttccgtgatgtgctcgagcggccctccgtctcccggggggtgacggtctac
gccgatgtcgcgtcgtcggttgagagagttgaggccctggccctcctcgcaggactggcg
cgcgactacgacgaagccaagcgacgccgcggtctgatcgatttctccgaccaggtggcc
ggcgccttcgaggccgtctcgcggcacccggaggtgggcgagcagatgcgcagccgctac
cgggtcgtcctcctggacgagtaccaggacacctcggtcgtccagacggaccttctggcg
gcattgttcgccgataccgcggtgatggccgtcggtgatccccatcaggcgatctatggg
tggcgcggcgcgagcgcagggaatctgggcggcttcgccggcgcgttcgcacggcacacc
gcgtgtcagagcttcgcgctcatgaccagctggcgcaatgccggcagagtcctcgtcgcc
gcgaacgccgttctggctccgctgaccgactccgctccggtcgacgtcccaccgctgcgg
acccggccggacgcgccggagggcgacgtggacgtggtgttcgagcccgacatcgatacc
gaatccgatcgggtcgccgagtggttcgaccgcgtgcgtggcgagcgtgccgcggagggc
cgggcgacgacgggcgccgtgctcttccgcaacaagaagcacatggtgcggttcgcggat
gcgctcggccgacgcggaatcccgcaccgcatcctcggcctcggcggattgctctccaca
ccggaggtcgtggacgtcgtcgcggtcctccgcgtcctgagcgatcccgacgccggctcc
gcactgctgcgtctgctcagcggcccacgctggtcgatcgggctccccgacctccgtgcg
ctccgggatctcgccacccgtctgtcccggcacgacgccgcgctgacgccgcttcccccg
gcggtcatcgagacgctccgttccagcgcgtcggacgacggggtgtctctgatcgatgcc
ctcgacttcgtcgctcgccagcccgtgacgcacggctggctgtccgacttctcggaggag
gggcgcgtgcgtttgaaggacgcgggcctgacgttcggcgggctccggcgagcggtgggt
gccccgatcggcgaactcgtccgcctgatcgaggcggagctgcgcctcgacatcgaactg
gcggcgaatgagacgcgcggcccggcgcgcatcgcgtccgcgcagttgcgtgcgttcgtg
gacgaggtgcatgcgttcctcgacgccgacgatacaggcaccgtggccagcctcctcgcg
tggctcgaccatgcggagcgtcaggacgacctcgcaccgcggacggagcctcccgaggag
gatgtggtccaactgctgacgatccacggatcgaaggggctcgaatgggatgccgtggcc
gtggtccggctggtgaccgacgaactgcccggagcggcgcgcgacacccgtggctggctc
ggtttcggcgtgctcccgtacgagttccgcggagaccggcgttggctccccgacctggcc
tgggaagcggagcgtgcggcgacccagcaggatctccgagacaatttcgcagatttcgtc
ctcgcacatcgaacgcgtcagctcgaagaagaccggcgtctcgcatacgtcgcggtgacc
cgcgcgcgggatcacctgcttctgagcggcgcgacgtggtcgggcacacgcaagccccgc
gcgcgcagcgtgttcctcgatgagatgtgcaccgcgttgcgacgcgacgtgcccgctgcg
gaggagacggacgatccgtacgacggcgagcggcgtaccctccggtggccgctcgatccg
ctgggtgcacggcgaactgcggtgacccgggcggcggacgccgtcggggcggtgcgcgct
gaggatgtcacgccggaggacgacatcctgctgttgctgcaggagcgtgacgcgcgtacc
tcagcgcgggaggtccgcgcgccgacgaggatcgccgcctcccggtacaaggagttcctc
gcggattaccaaggcgccatcgggcggatcgcgcggccgcttccggaacgcccctaccgc
gagacccggctgggaaccctgttccattcgtgggtcgaagagcggtcgggtctgatcggc
cgacgcagtgtctgggacgaggcgctgtgggaggtcgacgatgagactctccacgatgtc
gagcagacggcggcgtcgacggacgacgcggcgcgtcttgcccggctccaggcggctttc
ctggcatctgagtgggcgggcctgcgccccatcgaggtcgagtgcgagatcgacttcacc
gacaccgagctcgacggcacaccccgcgtgatcgtctgccgaatcgacgccgtctaccgt
cgggacgaccgaggcggccgcatcgagatcgtggattggaagaccgggagggcgcctcga
accgagtccgagcgtcaggaccgtctggtccagctcgagctctaccgccgggcataccat
gccgcgcgaggcatcccgctgggcgagatcgacgtcgcgctcttctatgtggcggacgac
ctcgttctgcgcgcctga
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