Mycobacterium canettii CIPT 140070010: BN42_10279
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Entry
BN42_10279 CDS
T02421
Symbol
gabD
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP+] dependent (SsdH) GabD1
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mcx
Mycobacterium canettii CIPT 140070010
Pathway
mcx00250
Alanine, aspartate and glutamate metabolism
mcx00310
Lysine degradation
mcx00350
Tyrosine metabolism
mcx00650
Butanoate metabolism
mcx00760
Nicotinate and nicotinamide metabolism
mcx01100
Metabolic pathways
mcx01120
Microbial metabolism in diverse environments
Module
mcx_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN42_10279 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN42_10279 (gabD)
00310 Lysine degradation
BN42_10279 (gabD)
00350 Tyrosine metabolism
BN42_10279 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN42_10279 (gabD)
Enzymes [BR:
mcx01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN42_10279 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN42_10279 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN42_10279 (gabD)
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Gene cluster
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Motif
Pfam:
Aldedh
Acetyltransf_6
LuxC
Motif
Other DBs
NCBI-ProteinID:
CCK58252
LinkDB
All DBs
Position
complement(294594..295967)
Genome browser
AA seq
457 aa
AA seq
DB search
MPIATINPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARWANATADLLEA
EADQAAAMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADAAKVGASAAYGR
YQPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPD
GCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGGEIKPTVLELGGSDPFIV
MPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDP
DTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYT
EEVFGPVASVFHAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFINGMT
VSYPELPFGGVKRSGYGRELSAHGIREFCNVKTVWIA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcgccaccatcaacccggctaccggcgagacagtcaagacattcactgcagcg
acagatgacgaagtcgacgcggcaatagcccgggcccaccggcggttcgccgactaccgc
cagaccagcttcgcccagcgcgcccggtgggccaatgccaccgccgacttgctggaagcc
gaggccgaccaggccgccgcgatgatgacgctcgagatgggcaagacgctggccgcggcc
aaagccgaggcactgaagtgcgccaaaggttttcgctactacgccgaaaacgccgaggcg
ttgctggccgacgaacccgccgatgcggccaaggtcggggcgtcggcggcctacggccga
taccaaccgctgggtgtgatcctggccgtgatgccgtggaactttccgctgtggcaggcc
gtccggttcgccgcaccggcgctgatggccggaaacgtcggcctgctcaagcacgcgtcg
aacgtgccgcaatgcgcgctgtacctggccgacgtcatcgcccgaggcggcttcccggac
ggctgcttccagacgttgctcgttggctcgggtgccgtcgaagccatcctgcgcgatccc
cgagtcgcggcggccacgctcaccggcagcgaacccgccggccaatcggtgggcgctatt
gccggtggcgagatcaagccgaccgtgctcgagctcggcggcagcgacccgttcatcgtt
atgccgtcggccgatctggacgccgcggtcagcaccgccgtcaccggccgggtgcagaac
aacggccaatcctgcatcgccgccaagcggttcatcgtccacgccgacatttacgatgat
ttcgtcgacaagttcgtcgcgcggatggcggcgttacgggtcggcgacccgaccgacccg
gacaccgacgtgggcccgctggccaccgagcagggccgcaatgaggttgccaagcaagtc
gaggatgctgccgcggcgggcgcggtgatccggtgcggcggaaagcgtctcgaccggccg
ggctggttctacccgccgaccgtgatcaccgacatctccaaggacatggctctctacacc
gaggaggtcttcggtccggtcgcctcggtgttccacgcggcgaacatcgacgaggccgtc
gagatcgccaacgccaccaccttcgggctgggatccaacgcctggacccgcgacgagacc
gagcaacgacgcttcatcgacgacatcgtggcgggccaggtgtttatcaacggcatgacg
gtgtcctatcccgaattgccgttcggcggggtcaagcgctcgggctatggccgggaactg
tccgcacacgggatacgcgagttctgcaacgtcaagaccgtctggatcgcctag
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