Mycobacterium canettii CIPT 140070010: BN42_20676
Help
Entry
BN42_20676 CDS
T02421
Name
(GenBank) Putative transcriptional regulatory protein (probably LuxR-family)
Organism
mcx
Mycobacterium canettii CIPT 140070010
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Guanylate_cyc
Sigma70_r4_2
HTH_23
AAA_16
HTH_38
AAA_22
NB-ARC
nSTAND1
HTH_29
HTH_24
nSTAND3
HTH_40
AAA_25
HTH_7
Sigma70_ECF
RsgA_GTPase
DUF4807
Motif
Other DBs
NCBI-ProteinID:
CCK58918
LinkDB
All DBs
Position
complement(1008142..1011405)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSRLLPTGTVTLLLADVEESTHLWQMCPEDMAAAIAHLDHTVSEAITNHGGVQPVKQYEG
DSFVAAFTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDL
AHGGQVVLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIREKFPPLRT
AKSSPTSILPAQFTTFVGRRAQISEVRALLAQNRLVTLCGTGGVGKTRLAIQIASASELR
DGLCFVDLAPITESGIVAATAARAVGLPDQPGRSTMDSLRRFIGNRRMLMVLDNCEHLLD
ACAALVVELLAACPELTILATSREPIGVAGEITWRVPSMSITDEAVELFADRASRVQPGF
TIANHNAAAVGEICRRLDGIPLAIEFAAARVRSMSPLEIADGLDDCFRLLAGGVRGAVQR
QQTLRASIDWSHALLTETEQILFRRLAPFVGGFDLAAVRAVAAGSDLDPFSVLDQLTLLV
DKSLVVAEDCQGRTRYRLLETVRRYALEKLGDSGEADVHARHRDYYTALAGSLNTPADND
HRRLVARAETEIDNLRAAFAWSRENGHITEALQLASSLQPIWFGRAHLREGLSWFNSILE
DQRFHRLAVSTAVRARALADKAMLSTWLATSPVGATDIIAPAQQALAMAREVGDPAALVR
ALTACGCSSGYNAEAAAPYFAEATDLARAIDDKWTLCQILYWRGVGTCISGDPNALRAAA
EECRDLADTIGDRFVSRHCGLWLSLAQMWAGNLTEALELSREITAEAEASNDVPTKVLGL
YTQAQVLAYCGASAAHATAGACIAAATELGGVYQGIGYAAMTYAALAAGDVTAALEASDA
ARPILRAQPDQVTMHQVLMAQLALAGGDAIAARQFANDAVDATNGWHRMVALTIRARVAT
ARGEPELARDDAHAALACGAELHIYQGMPDAMELLADLAGEVGSHSEGVRLLGAAAALRQ
QTRQVRFKIWDAGYQASVAALREAMGGEDFDRAWAEGAALSTDEAIAYAQRGRGERKRPA
RGWGSLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLASRVQLVDEA
ARRGSPS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagattgctgccgacgggcacggtgacattgctcttagccgacgtcgaggaatcg
acccacctatggcaaatgtgcccagaggacatggcggccgccatcgcgcacttggatcac
actgtgtcggaagctatcacgaatcacggtggggtgcagccggtcaaacagtacgagggt
gatagcttcgttgcggctttcactcgcgctagcgatgccgctgcatgcgcgctggatctg
cagcggacctcgctcgcgccgatccgactacgtataggtcttcatacaggcgaggtacag
ttgcgcgacgaactctatgtcggccccactatcaaccggacggcgcgtctccgcgatttg
gcacacgggggtcaggttgtcctgtcagctgcgacaggtgatttagtgactggccggctc
ccagccgatgcatggcttgtcgatctcggccgccacccgctgcgcggtctacctcgtccc
gaatgggtcatgcagttgtgccaccccgacattcgcgaaaagtttcccccactgcgcacg
gccaaatccagcccgacatcgattctcccggcgcagttcaccacatttgtgggccgccgt
gcgcaaataagcgaggtgcgggcactgttggcgcagaaccggctcgtgacgctatgcgga
accggcggtgtcggcaagacccgtctggcaatccagatcgcgagtgcatccgaacttcgc
gacggtttgtgctttgtcgatctggccccgatcactgaatccgggatcgtcgcagccacg
gctgcgcgcgccgtgggtctgcccgatcagccgggccgttcaaccatggatagtcttcgc
cgatttatcggcaatcgccgcatgctcatggtgttggacaactgtgaacatcttctcgat
gcgtgcgcagcgttggtcgttgagctattggcggcctgtccggagctgacgatcttagcg
actagccgggagccgatcggggtggccggcgagatcacctggcgcgtaccgtcgatgtcg
ataaccgacgaagcagtcgaattgtttgctgaccgagccagccgagttcagcccgggttc
accatcgccaatcacaacgccgcggccgtcggcgagatctgccggcggctagacggcata
ccgctggcgatcgagttcgctgccgcacgggtgcggtcgatgtcaccgcttgagattgcc
gacggtctggacgactgtttccggctgttggccggcggtgtgcggggcgcggtgcagcgc
cagcagacacttcgcgcctcgatcgattggtcgcatgcactgctgaccgagaccgagcaa
atcttgtttcggcgactggcgccatttgtcggcgggttcgacctcgccgcggtgcgggcg
gtcgccgccggtagcgacctggatccgttttcggtgcttgatcagctgaccctgctggta
gacaagtcgctggtggtggccgaagactgccagggccgcacgcggtaccggctgctggaa
acggtgcgtcggtacgcgctggaaaaactgggcgactccggcgaggccgatgtgcacgca
cgtcaccgtgactactacacggcgctggccggctcactcaacactcctgcggacaacgat
caccgacggcttgtcgcccgggctgagaccgagatcgacaacctgcgcgccgcgttcgcc
tggagccgggaaaatggccatatcaccgaagcgttacagctcgcctcttcgctgcaacca
atctggttcgggcgggcgcacctgcgcgaggggttgtcctggttcaactcgatcctggaa
gaccaaaggttccaccggctcgctgtgtcaacagcagtacgggcgcgagcgctcgctgac
aaggcaatgctcagtacctggctggccaccagtccggtaggcgccaccgacatcatcgct
cccgcacaacaagcgctggccatggcacgtgaggtgggcgaccccgccgcgttggtgcgg
gcgctcaccgcctgcggctgcagcagtggctacaacgcggaggccgctgcgccctatttc
gccgaagcgaccgacctggcacgcgctattgacgacaaatggacgctgtgtcaaatcctc
tactggcggggggtggggacctgcatatcaggtgacccgaatgctttgcgagccgcggca
gaagaatgccgcgacctggccgacaccatcggcgaccggttcgtctcacgtcactgcggc
ttgtggcttagtttggcgcagatgtgggctggcaatctgaccgaggccctcgagctatcc
agagaaatcactgccgaggccgaggcatccaacgatgtgccgacaaaggttctcggccta
tatacccaagcccaggtgctggcgtattgcggcgccagcgcggcccacgccacagccggg
gcgtgcattgcagccgcgacggagttaggcggtgtgtaccaaggcattggttatgcggcg
atgacgtacgccgcgctggccgccggtgatgtcacggcggcgctcgaggccagcgacgcg
gcgcggccgattcttagggcccagcccgaccaggtgaccatgcaccaggtcctgatggcg
cagttagccctggcaggaggtgatgcgatcgccgcacgacagttcgccaacgacgccgtc
gatgcgaccaatgggtggcaccgaatggtggcgttgacaatacgcgcgcgcgtagccacc
gctcggggcgaaccagaacttgcgcgcgacgatgctcatgctgcgctggcgtgcggcgcc
gagctgcacatctaccagggcatgccagatgccatggaactcctcgccgacctggccggc
gaggtcggcagtcactccgaaggtgtccgccttctcggtgccgcagccgcccttcggcaa
cagacacgtcaggtccgcttcaagatttgggatgccggctaccaggcctcggtggcggcg
cttcgtgaggcgatgggcggtgaggatttcgaccgcgcctgggccgagggggccgccttg
tccaccgacgaggcgatcgcatatgcacaacgcggtcgcggtgaacgcaaacgaccagcc
cgcgggtggggctcgttgaccccgaccgaacgcgacgtcgtgcggttggtcagcgagggg
ttatccaacaaggacattgcaaaacggcttttcgtctcgccgcgcactgtgcaaacccac
ctcacccacgtctacgccaaacttggcttggcctcccgagtacaactggtggacgaggcg
gcacgccgcggctcaccctcgtga
DBGET
integrated database retrieval system
