Mycobacterium canettii CIPT 140070010: BN42_40618
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Entry
BN42_40618 CDS
T02421
Name
(GenBank) Conserved protein of unknown function
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mcx
Mycobacterium canettii CIPT 140070010
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcx03016
]
BN42_40618
Enzymes [BR:
mcx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BN42_40618
Transfer RNA biogenesis [BR:
mcx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BN42_40618
Prokaryotic type
tRNA splicing ligases
BN42_40618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CCK60752
LinkDB
All DBs
Position
3092487..3093785
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AA seq
432 aa
AA seq
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MQVVNVATLPGIVRASYAMPDVHWGYGFPIGGVAATDVDNDGVVSPGGVGFDISCGVRLL
VGEGLDREELQPRLPAVMDRLDRAIPRGVGTAGVWRLPDRNTLQEVLTGGARFAVEQGHG
VALDLERCEDGGVMTGADAAKISDRALQRGLGQIGSLGSGNHFLEVQAVDRVYDPVAAAP
MGLAEGTVCVMIHTGSRGLGHQICTDHVRQMEQAMGRYGITVPDRQLACVPVHSPDGQAY
LAAMAAAANYGRANRQLLTEATRRVFADETGTPLDLLYDVSHNLAKIETHPIDGQLRSVC
VHRKGATRSLPPHHHELPAELAAVGQPVLIPGTMGTASYVLAGVTGNPAFFSTAHGAGRV
LSRHQAARHTSGEAIRASLAKRGIIVRGTSRRGIAEEKPEAYKDVDEVIEASHQSGLARK
VARLVPLGCVKG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggtcaacgtggctacgctgccggggattgtccgggcctcgtatgcgatgccc
gatgtgcactggggatatggtttcccaatcggcggcgtggccgcaaccgacgtcgacaat
gatggagtcgtttccccaggcggcgtcggcttcgatatttcgtgcggcgtaagactcttg
gtcggcgaagggctggaccgcgaggagctgcaaccacggttgccggcggtcatggaccgg
cttgatcgcgcgataccgcgcggagtgggcacggcgggtgtgtggcgactgcccgaccgg
aacacgctgcaggaggtgctcaccggtggtgcccggtttgcggtggaacaggggcatggc
gtcgcgctagacctcgagcggtgcgaagacggcggtgtgatgacaggagcggacgcggcc
aaaatcagtgaccgggccctccaacgggggcttgggcagatcggcagccttggctcgggc
aaccacttcctggaagtccaggccgtggaccgcgtctacgatccggttgcggccgcgccg
atgggtctggcggaagggaccgtctgcgtgatgatccacaccggctcacggggcctgggc
catcagatctgcacggatcacgtccgccagatggaacaagccatgggccgatacggaatc
acggtgcccgatcgccaattggcgtgtgtgccggtgcactctcccgatgggcaggcctat
ctcgccgcaatggcggcggcggcaaactacggacgcgccaaccgccaactgctgaccgag
gcgacgcgtcgtgtgttcgctgatgaaaccggaacacctctggacctgctctacgacgtg
tcgcacaacctggccaagatcgagacgcatccgatcgacggtcagctgcgctcggtgtgc
gtgcaccgcaagggcgccacccgctcactgccgccgcaccatcacgagctgccggccgaa
ctggcagcggtcggccaacccgtgctgatacccgggacgatgggtacggcgtcatatgtg
ctcgccggggtcaccggcaacccggcgttcttttccactgcgcatggtgctgggcgggta
ctgagccgtcaccaggccgcccgccacaccagcggtgaagcgatacgcgccagcctcgca
aaacgtggcatcatcgtccgcggtacctctcgtaggggtatcgccgaggaaaagccggag
gcctacaaagacgtcgacgaggtcatcgaagccagccatcagagtggcctcgcgcgcaaa
gtggctcgccttgttcccttgggctgtgtcaaaggatga
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