Mycobacterium canettii CIPT 140070010: BN42_40991
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Entry
BN42_40991 CDS
T02421
Symbol
hupB
Name
(GenBank) Putative DNA-binding protein Hu homolog HupB (histone-like protein) (HLP) (21-kDa laminin-2-binding protein)
KO
K03530
DNA-binding protein HU-beta
Organism
mcx
Mycobacterium canettii CIPT 140070010
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcx03032
]
BN42_40991 (hupB)
03036 Chromosome and associated proteins [BR:
mcx03036
]
BN42_40991 (hupB)
03400 DNA repair and recombination proteins [BR:
mcx03400
]
BN42_40991 (hupB)
DNA replication proteins [BR:
mcx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN42_40991 (hupB)
Chromosome and associated proteins [BR:
mcx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BN42_40991 (hupB)
DNA repair and recombination proteins [BR:
mcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BN42_40991 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CCK61093
LinkDB
All DBs
Position
complement(3468003..3468647)
Genome browser
AA seq
214 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPA
KKATKAAKKAATKAPARKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKAS
VRKAATKAPAKKAGAKRPATKAPAKKATARRGRK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtcggcag
gcgaccgccgctgtcgagaatgtcgttgacacgattgtgcgtgcggtacacaaaggcgac
agcgtcaccattaccgggttcggtgtgttcgaacagcgtcgccgcgcggctcgagtggcc
cgcaatccgcgtaccggcgagacagtcaaggtgaagccgacgtcggtgccggcgttccgc
ccgggcgcgcaattcaaagcggttgtgtctggcgcgcagcgtctcccggcagaaggaccc
gctgttaagcgtggtgtgggggccagtgcagccaagaaggtagcgaagaaggcacctgcc
aagaaggcgaccaaggccgccaagaaggcggcgaccaaggcgcccgccaggaaggcggcg
accaaggcgcccgccaagaaagcggcgaccaaggcgcccgccaagaaagctgtcaaggcc
acgaagtcacccgccaagaaggtgaccaaggcggtgaagaagaccgcggtcaaggcatcg
gtgcgtaaggcggcgaccaaggcgccggcgaagaaggcaggggccaagcggccggctacc
aaggctcccgccaagaaggcaaccgctcggcggggccgcaaatag
DBGET
integrated database retrieval system
