Mycobacterium canettii CIPT 140070010: BN42_41344
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Entry
BN42_41344 CDS
T02421
Symbol
sigF
Name
(GenBank) RNA polymerase Sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mcx
Mycobacterium canettii CIPT 140070010
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcx03021
]
BN42_41344 (sigF)
Transcription machinery [BR:
mcx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN42_41344 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
MarR
HTH_IclR
MarR_2
DUF7343
Sigma70_ECF
HTH_31
IF2_N
Motif
Other DBs
NCBI-ProteinID:
CCK61413
LinkDB
All DBs
Position
complement(3809404..3810189)
Genome browser
AA seq
261 aa
AA seq
DB search
MTARAAGGSASRANEYADVPEMFRELVGLPAGSPEFQRHRDKIVQRCLPLADHIARRFEG
RGEPRDDLIQVARVGLVNAAVRFDVKTGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPSASELAAELGMDRAEVIEGLLAGSSYHTLSIDSGGGSD
DDARAITDTLGDVDAGLDQIENREVLRPLLEALPERERTVLVLRFFDSMTQTQIAERVGI
SQMHVSRLLAKSLARLRDQLE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgcgcgctgccggcggttctgcatcgcgagctaacgaatacgccgacgttccg
gagatgtttcgcgagctggttggtttgcctgccggctcaccggaattccagcggcaccgg
gacaagatcgttcagcggtgcttgccgctggccgatcacatcgcgcggcggttcgagggt
cgcggcgaaccgcgtgacgaccttattcaggtcgcgcgggtcgggctggtcaacgccgcg
gttcgcttcgacgtgaagaccgggtcggacttcgtctccttcgcggttcctaccatcatg
ggcgaggtccgacgacacttccgcgacaacagctggtcggtcaaggttccccggcgtctc
aaggaactgcatctgcggctaggtaccgccaccgccgatttgtcgcagcggctcgggcgg
gcgccgtcggcatcggagctcgccgcggagctcgggatggaccgcgccgaggttatcgaa
ggtttgctggcgggtagttcctaccacaccttgtccatcgacagcggtggcggcagcgac
gacgatgcccgcgcaatcacagacaccctgggcgacgtggatgcgggtcttgaccagatc
gagaatcgggaggtgcttcgtccgttgctcgaggcgttgcccgagcgggaacgaacggtc
ttggtgctcaggttcttcgactcgatgacccaaacgcagatcgccgagcgcgtcggtatt
tcacagatgcacgtgtcgcggctgctggccaagtcattggcacggctacgggatcagttg
gagtag
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integrated database retrieval system
