Mycoavidus cysteinexigens: MCB1EB_0625
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Entry
MCB1EB_0625 CDS
T05801
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mcys
Mycoavidus cysteinexigens
Pathway
mcys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCB1EB_0625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcys03019
]
MCB1EB_0625
03009 Ribosome biogenesis [BR:
mcys03009
]
MCB1EB_0625
Enzymes [BR:
mcys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MCB1EB_0625
Messenger RNA biogenesis [BR:
mcys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCB1EB_0625
Ribosome biogenesis [BR:
mcys03009
]
Prokaryotic type
rRNA processing factors
MCB1EB_0625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BBE08786
UniProt:
A0A2Z6ETP5
LinkDB
All DBs
Position
complement(713932..716721)
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AA seq
929 aa
AA seq
DB search
MKRILFNATQREELRVAIVVGQKLIDIDIETVGQEQRKGNIYKGVVTRIEPSLEACFVNY
GEERHGFLPFKEVARQYFKEGIDMRSARIQDVLHEGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGDERQELRDTMAQLQLPDGMSMIARTAGIGRSTEELQ
WDLNYLMQLWRAIEEAAHDMQGPLLIYLESSLVIRAIRDYFQPDIGEILIDTAEIEEQAR
AFMGIVMPDNLHKVKRYHDDVPLFSRFQIEHQIETAYARTVSLPSGGSIVIDHTEALVSV
DVNSARSTKGADIEETALRTNLEASDEVARQLRLRDLGGLIVIDFIDMESAKNQREVEQR
LKDALKHDRARVQMSKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRNAESSALQ
ILRIIQEEAMKENTAAIHCQVPIEVSAFLLNEKRQEINKIESRFKVGIILIPNKYLETPH
YKLERLRHDDPNIDEVHISHRMTEKAVREMEQEMAYSKRTEEVRPKQEAAVKGISPEHPA
PIAKRSKSSRAASAHRLETEDSGLFSWFKRWFSFSPAEPSTASEKNTPQRTRTTQATTGR
AADKSVAQERNNNSGRTRRGSNASRVSEPGNERAARNGGRRDARAPAEEPVETLEAATAT
QERSERQERGRRPERSGRQDHKRAQTPAPAPSQTVAATLPDAPRTERSDEFPVAATARPD
SVAAFVPHTTTAQPEGEERRRRRRGRRGGRRERDDANQTRTHEVEFHTESTDVAQTADYA
PRLPEQAPAPQPQPQPQPQPQPQPQPQPQPQPQPQPQPESVSVPPARTAIPSQPAVAATP
AAQPTSSPAPVPASLPEPKMASRPAALSRMLEATNLVLVNTDSAKLHSAHEATAAITEPP
RIRRERKRLPPAASAPIQQVETSKMAETK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatactttttaacgccacgcaacgagaagaacttcgtgtggctatcgtcgtt
gggcaaaagctcatcgatattgatattgaaaccgttgggcaagaacaacgcaaaggcaat
atttataaaggagtcgtcacccgtattgagccctcgctagaagcctgctttgttaattat
ggcgaagaacgccatggttttttaccctttaaagaagtcgcgcgccaatattttaaagaa
gggatcgacatgcgctcggcgcggatccaagatgtgctgcatgaagggcaagaactgatc
gttcaggtcgaaaaagaagagcgcggcaataaaggcgcggccttgacgacctttatctca
ctcgccggacgctatttggtgctgatgccaaataatccgcggggcggcggcgtctcgcgc
cgcatcgaaggcgatgaacgccaagaactacgcgatacgatggcgcaactgcaattgcca
gacggcatgagcatgatcgcccgcaccgcagggattggccgcagcaccgaagaattgcaa
tgggatcttaattatctgatgcaattgtggcgcgccattgaagaggcggcccacgatatg
caaggcccactcctgatttatctggaatccagtttggtgatccgcgccatccgcgactat
tttcaacccgatattggcgaaattttaattgatacggcggagattgaggaacaggcgcgc
gcctttatgggcatcgtcatgcccgacaatctgcataaggtcaagcgctaccacgacgat
gtaccgctgttttctcgctttcagatcgaacatcaaattgagaccgcttatgcgcgtacc
gtgtctttgccctctggcggctccatcgtcatcgaccatactgaggcattagtctccgtc
gatgtcaattccgcccgctcaacaaaaggggccgacattgaagaaaccgcgctgcgcacg
aatttagaagcctctgacgaagtggcgcggcagctcaggcttcgagatctaggcggtttg
atcgtcatcgattttatcgatatggaatccgccaagaatcagcgtgaagtcgagcagcgc
ctaaaagacgcgctcaagcatgaccgagcgcgcgtgcagatgagcaaaatttcgcgcttt
gggctgatggagttatcgcgtcaacggctacgccccgctttatccgaaggtagccatgtc
acgtgtccgcgctgtaacggcacaggccatattcgcaatgccgaatcttcagctttgcaa
atcttgcgcattatccaagaagaagcgatgaaagaaaacactgcggcgattcattgccaa
gtgccaattgaagtttcagccttcttgctgaatgaaaaacgccaagaaatcaacaaaatt
gaaagtcgctttaaagttggcattatcttaatcccgaacaaatatctggaaacgccgcac
tacaagctggaacggttgcggcacgacgatcctaatattgatgaagtgcatatcagtcac
cgcatgactgaaaaagccgtgcgcgaaatggaacaggaaatggcttacagcaagcgtact
gaagaagtccgccccaaacaagaagctgcagttaaagggatttcgccagaacaccctgcg
cctatcgctaagcgtagcaaatccagtcgcgcagctagcgcacatcgactggaaacagaa
gattccggtttatttagctggtttaagcgctggtttagtttctcccctgccgagccgtcc
actgcttctgaaaaaaacactccgcaacgcacacgcacgacccaagccacaactggccga
gctgcggataaaagcgtggcgcaagagcgcaataataatagcggtcgcacacgccgcggt
agcaacgcaagccgtgttagcgagcctggtaacgagcgggcagcgcgtaacggcgggcgg
cgcgatgcgcgcgctccagctgaagagccagtagaaactcttgaggcagcaaccgcgacg
caggagcgtagcgaacgtcaagaacgcggcagacgcccagaacggagcggacgccaggat
cataaacgagcgcaaacccctgctccggcaccgagtcaaacggtcgcagctacactccca
gacgctccaagaacagagcgttcagatgaatttcctgttgccgcaactgcgcgcccagat
tctgttgctgcgtttgtaccccacaccacaacggctcaacccgaaggcgaagaacgccgc
cgccgtcggcgcgggcgacgtggcggtcgccgcgaacgcgatgacgcaaaccaaactcgc
acccacgaagttgaatttcataccgagtccactgatgtcgctcaaaccgccgattatgca
ccgcgcttgccggagcaggctccggcgccacagccacagccacagccacagccacagcca
cagccacagccacagccacagccacagccacagccacagccacagccacagccagaaagt
gtaagtgtgccgcccgcccgcaccgccattccgagccaacccgctgtagccgcaactcca
gcagcacagcctacgagctcccctgcgccggtcccagcaagcttgccggaacctaaaatg
gcgtcaagaccggcggccttaagtcggatgctagaagcgacaaatcttgttctcgtcaac
acagatagcgctaaactgcacagcgctcatgaagccactgcggcaatcactgagccgccc
cgcattaggcgcgaacgcaagcgcttgccgccagccgcaagcgccccaatccaacaagtt
gaaaccagcaaaatggccgagacaaaataa
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