Mycoavidus cysteinexigens: MCB1EB_0812
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Entry
MCB1EB_0812 CDS
T05801
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mcys
Mycoavidus cysteinexigens
Pathway
mcys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MCB1EB_0812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcys03400
]
MCB1EB_0812
Enzymes [BR:
mcys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MCB1EB_0812
DNA repair and recombination proteins [BR:
mcys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MCB1EB_0812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BBE08973
UniProt:
A0A2Z6EU52
LinkDB
All DBs
Position
962715..966209
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AA seq
1164 aa
AA seq
DB search
MFKLFYSNRYEALADALLDDLAADQPDPWSTPSIIVPSVALRRRLELDIATRFGVCMNID
FAYLAQWLWTQLGRIYEVPKHSPFASEQLVWHCYRWLDARTWPAQHNARLSAYLQAADAT
MRYELAQRVALLFEQYLTYRPDWLNAWYAGHSPSALHITAPSPMLNDIGTHAAWRSDEAW
QAQLWRLLFAELAAPGETAPAAYRFLTEAATLKSETVARAAWPKCVRVFALPAIPPLHLA
LLRELARWIEVRVYLMNPCREYWHDIVDAARVSALALDNKVDYHETGNLLLAEWGKQTQA
QLHLLQELSDSALSTETALYIENEAPTWLAALQNAILNLQRWPVPPATGKDAETGVEVHV
CHSLMRQLEVLHDRLLALFDANPAWTPADVLVVLPNLAAAAPLIDAVFGATDSKRHIPYS
ITGLPRLQTNPIARVLYEMLELPARSIGVVALIEWLRTDALAARYAIRAEDQTQMDAAAA
STQRQKGGGDAVFETIRLWLASALARRGLASAHEVLTAPENLSAPERHTFADALMRLYLG
YALPAGALPLAEYLPMLSLSGAQASLLGSLSRFIDDLAEFADECERAHSAPAWRAILLNA
LERFFATDAESAQPIAELREMIIELTDVIAAGDATQQAIPAAVLRMAFGRVLNEPARGGV
PTGGVTFSALTSLRGLPYRVVCVLEVGDGVLPGKARTDEFDLMAAFSQIGDRQRRDDERA
VFLDLVLAARNYLLLAYTGRSIRDNTPLPSAAVVSELLDYLSQALAGPNATQTEMAAARA
RLVIEHPLQAFAAEYLSHEGPLFTYDPERAEIASALRSNPSSVEDNAAPFFSVPLPLEES
REIFLDDFERFWQHPGRALLRDRLGIELARAQRELSDFAPFALEYAGRDALAKRLLPGLL
AGDAQAEDGQANQTLGVPKSLFERASRIALASPELPDGATGVFEGTRELKALAALAARIR
MARAAGVASYPFTFELEPKWPDAPPIFSELTALAALGARIQFAGVLENVSQEGLLLYRHG
RPNARDYLSAWLRHLVLCELAPEGVKLRTVWLGDATNFTLIRVQDARRYLNELIALYRAG
RCAPLHFFPKSAWALMNEGEEAARRTWVGNQPTASHSLAEMEDAWFQLMLRGEPLEQMLD
ARFRALAQTVFAPLLEHLELTRSP
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagctgttttattcaaatcgctatgaagcgctagcggatgctttgctggatgat
ctggccgcggatcaaccggatccttggtctaccccctcgattattgtgccaagcgtggcc
ctacgtcgccggcttgaattggatattgcaacccgctttggcgtatgcatgaatattgat
tttgcgtacttggcgcagtggctatggactcagcttggccgcatatatgaggttcccaag
cattccccttttgcgtcagaacagttggtatggcattgttaccgttggttggacgcgcgt
acctggccggctcagcataacgcgcgactcagcgcctatttgcaggcggctgacgctacc
atgcggtatgaattggcccagcgggttgcgttactctttgagcaatatttaacctatcgc
ccggactggcttaatgcttggtatgctgggcattcacctagcgcgctgcacattacggcg
ccaagcccaatgttaaacgatatcggcacccatgcagcctggcgcagtgatgaggcttgg
caagcccaattatggcgcttgctgtttgctgagcttgcggcgccaggcgagactgcgcct
gctgcctatcgctttttaactgaagcagctacgttaaaatcagagacggtggcgcgcgca
gcttggcctaaatgcgtgcgggtctttgctttacctgcaataccgccattgcatttagcg
ctattgcgtgaacttgcgcgctggatcgaggtgcgcgtatatctgatgaacccttgccgt
gaatactggcatgacattgttgatgcggcccgagtgagcgccttggcgttagacaataag
gttgattatcatgaaactggcaatctgttgttagctgaatggggcaagcaaacccaagcg
cagttgcatttactgcaagagttgagtgacagcgcgctcagtaccgagaccgcgctgtat
attgagaatgaggcgccgacgtggctagcggcactgcaaaatgccatcctcaatttgcag
cgctggccggtgccgccagcaacaggcaaagatgctgagaccggagtcgaagtgcatgtg
tgccatagcctcatgcgtcaacttgaggtgttgcatgatcggctgctggcgttatttgat
gcaaatccggcttggaccccagccgatgtattagtggttttacctaacttggcggcagcc
gctccattgattgatgcagtgtttggcgcgaccgatagcaagcgccatattccttatagc
atcaccggattgccgcgcttgcagaccaatccgattgcgcgtgttttatatgaaatgctt
gagttacctgcccgtagcattggcgtggtggctttaatcgaatggctacgcaccgacgca
ttagctgcgcgttacgcaattcgcgctgaggatcagactcaaatggacgccgccgctgcc
tctacgcagcgccaaaaggggggaggtgacgccgtttttgaaacaatccggctctggctt
gccagcgcgctagcgcggcgtggtcttgcgtcagcgcatgaggttttgacggcgcccgaa
aacttgagtgcgccggagcgtcatacttttgcggacgcactaatgcgtctttatcttggc
tatgcattgccggccggggcgctgccgctagcagagtatctacccatgttatctctaagc
ggtgctcaagctagtctgttaggttctttgtcccgctttatcgatgatttggctgaattt
gcggatgaatgtgagcgggcgcactcagcacccgcctggcgcgcaattttgctgaatgcg
cttgaacgcttttttgcaaccgatgctgaatcagcgcagccaatcgctgaactacgcgag
atgattatcgagctcacggacgtcatcgcagccggcgatgcaacccagcaagcgataccg
gcagccgtactacgtatggcatttgggcgtgtcctgaatgaacccgcgcggggaggggtg
ccaaccggcggtgtgacattttctgcgctgacgagcttgcggggtttgccctaccgtgtg
gtatgcgtcttagaggttggggatggcgtattacccggtaaggcgcgcactgacgaattt
gacttaatggcggcttttagccagataggagaccgccaaaggcgcgatgatgagcgcgcg
gtgtttcttgacctagtgcttgctgcgcgtaattatctattgcttgcctatactggccgc
agtattcgtgacaacacgccactgcccagcgctgctgtggtcagtgaattattggattat
ttaagccaggcgttggctgggccgaatgctacccaaaccgaaatggcggcggcgcgcgcg
cggttggtgattgagcatccgttgcaagccttcgcggctgaatatttaagtcatgagggt
ccgctgtttacgtatgacccagagcgcgctgagattgccagcgcgctgcgttcgaatccg
tcttcggttgaagataacgcggcgccgttttttagtgtgccgttgccgctagaggaaagc
cgggaaattttcttggatgattttgagcggttttggcaacatcctgggcgggcgttattg
cgcgataggttaggtattgagctggcccgcgcgcagcgtgagctatccgactttgcgccg
tttgcacttgaatatgctgggcgggatgcgctggcgaaacgtttgttgccaggattgttg
gcgggggatgcgcaagctgaagacggccaggcgaatcaaactctgggcgtaccgaagagt
ttatttgaacgcgccagccgtattgcgcttgccagtcctgagctgccggatggggcgact
ggcgtatttgaggggacgcgcgaattgaaggccctagcagcacttgctgcgcgcattcgg
atggcccgcgcggcgggcgtggcaagttatccattcacatttgaattggagccaaaatgg
ccggacgcgccacctatattcagcgagctcacggcgctggcggctctcggcgcgcggatt
cagtttgccggtgtattagagaacgtcagtcaggaaggattactgctgtaccgtcatggg
cgacccaacgcgcgcgactacctgagcgcatggctgcgtcatttggttttatgcgagttg
gcgccagagggcgttaagctgcgtacagtatggctaggcgacgccactaactttacttta
attcgggtccaagatgcgcgccggtatctaaacgaattaatcgcgctgtatcgcgcgggt
cgttgtgcacccctgcattttttccctaaaagcgcctgggctttgatgaatgagggagag
gaagctgcgcgtagaacatgggtcggcaatcaaccaaccgcatcgcacagcctggctgag
atggaggatgcatggtttcaacttatgctgcgcggcgaaccgcttgaacagatgttagat
gcgcgttttagagcgctggcacaaaccgtgttcgcgccattgctcgagcatcttgagctg
acgcgcagcccataa
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