Mycoavidus cysteinexigens: MCB1EB_0907
Help
Entry
MCB1EB_0907 CDS
T05801
Name
(GenBank) ATP-dependent rna helicase protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mcys
Mycoavidus cysteinexigens
Pathway
mcys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCB1EB_0907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcys03019
]
MCB1EB_0907
Enzymes [BR:
mcys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCB1EB_0907
Messenger RNA biogenesis [BR:
mcys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCB1EB_0907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
HEM4
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BBE09068
UniProt:
A0A2Z6EUH4
LinkDB
All DBs
Position
1108816..1110264
Genome browser
AA seq
482 aa
AA seq
DB search
MSETLISSASETYVEDSPCFDHFGLHADILKALAGQGYTTPTPIQAQAIPVILAGHDVMG
VAQTGTGKTAGFSLPLIQQLVPFANTSASPARHPVRALVLTPTRELADQVAKNVWTYAEH
TALRSTVVFGGMDMQPQVAELRRGVEILIATPGRLLDHIQQKNVQLDQVQILVLDEADRM
LDMGFLPDLQRISNLLPRERQTLLFSATFSNEIKKLAASYLQNPITIEVAQRNSTATNVR
QIVYEVADGDKQAAVVQLIRQRGLKQAIIFCNSKIGASRLARQLEREGIIVAAIHGDKTQ
NERMQALDAFKQGALEMLVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGA
SGEALSLCSPHESKHLAEIEKLIQRALERESLIIETARVPSRTRHRDHPSSARHATGKRS
AFDAQTAELDDFFSKPYQPSNPILPANSAGADSTHANHPKVAPKRPLAALLGGMSYKPKA
NR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacacttatttcgtccgcttctgaaacctatgtcgaggattcgccgtgtttt
gaccattttggcctccatgccgatattttaaaagcattggctgggcaaggctacacgacg
ccaacaccgattcaggcgcaggcaatcccagtgattcttgcgggccatgatgtgatgggc
gtagcgcaaacgggtaccggcaaaaccgcaggcttttcattgccgttaattcaacagctt
gtgccgtttgcgaataccagcgcttctccggcacggcatccagtgcgtgcattggtatta
acgcctacgcgtgagttagccgaccaagtagctaaaaatgtgtggacctatgccgaacat
acggcattacgcagcactgtcgtatttggtggcatggatatgcagccgcaagtggctgaa
ttacggcgtggcgtcgagattttgattgccacgcctggacgcctgttagatcatatacag
caaaaaaacgtccaattggaccaagtccaaatattagtgttggacgaagcagatcgaatg
ttagatatgggcttcttgcctgatttgcagcgcatttcaaatctcttgccgcgtgagcgg
cagactctgctgttttctgcgactttttcaaatgaaatcaaaaaattagccgccagttat
ttgcagaacccaattacgatcgaagtcgcgcagcgtaattcaactgctacaaatgtccgc
caaattgtctacgaagtggcggacggcgataagcaggcagcggtggtccaattaattcgc
cagcgtggtttaaagcaagcgattattttttgcaatagcaaaatcggcgcgagccgactg
gcgcggcaattggagcgcgaagggatcatcgtagcagccattcatggcgataaaacccag
aatgaacggatgcaagcgctcgatgctttcaagcagggcgctctcgaaatgctggttgcc
acggatgtcgctgcgcgtggactggatattgctgagctacctgcagtgattaattttgat
ctaccttttaatgcagaagattatgtgcaccgaattggccgtactggccgggcgggggct
tctggggaagcgctttcattgtgcagcccacatgaatctaagcatctagcagagattgag
aaacttattcagcgcgcgcttgagcgtgaatcgctgataattgaaacggcgcgtgtacca
agtcgtacgcgccatcgagatcatccttcttccgcgcgtcacgcaacgggtaagcgatct
gcgttcgatgcgcaaacggcggagctggacgattttttcagtaaaccttaccagccctct
aatcccatcctgccagccaattcggcaggggcagacagtactcacgcgaatcatccgaaa
gtagcgccaaagcgtccgttagcagccctgctaggtggcatgtcttataagcctaaggcg
aaccggtaa
DBGET
integrated database retrieval system
