Mycoavidus cysteinexigens: MCB1EB_1268
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Entry
MCB1EB_1268 CDS
T05801
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcys
Mycoavidus cysteinexigens
Pathway
mcys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCB1EB_1268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcys03021
]
MCB1EB_1268
03019 Messenger RNA biogenesis [BR:
mcys03019
]
MCB1EB_1268
Transcription machinery [BR:
mcys03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MCB1EB_1268
Messenger RNA biogenesis [BR:
mcys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCB1EB_1268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBE09429
UniProt:
A0A2Z6EVE0
LinkDB
All DBs
Position
1579018..1580280
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSALIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPETSYLASPDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
CQPPEASKHKIMFENLTPLHPNKPLLLERELRGEENITGRIIDMIAPIGKGQRGLLVASP
KSGKTVIQQHIAHAIKANHPDIKLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPASRHV
QVAEMVLEKAKRLVEMKHDVVILLDSITRLARAYNTVVPTSGKVLTGGVDANALQRPKRI
FGAARNVEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRMAEKRIYPAINL
NKSGTRREELLIKPEILQKIWVLRKFIHDMDEVEALEFLLDKFKQTKNNAEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatctgagctcaaatctttacacgtatccgcccttattgaaatggccaatggc
ctagaaattgaaaatgcaaaccgcctgcgtaagcaggaactcatgtttgcgatcttaaaa
aaacgcgcaaagactggcgaaactatctttggcgatggcacgctcgaagtgttgccggat
ggctttggttttttacgctcgccagaaacgtcctacttagcgagtcccgacgatatttat
atcagtccatcgcaaattcgacgttttaatttacatactggcgatacgattgaaggggaa
gtccgtacccctaaagatggcgagcgttacttcgccctcgtgaaagtggataaagtcaat
tgccaaccccctgaggcctcgaaacataaaattatgtttgagaacctcacgccgctccac
ccgaataaaccgcttctgctagagcgtgaattgcgcggcgaagaaaacattacggggcgg
atcatcgatatgatcgcacccattggcaaaggccaacgcggtttacttgtggcctcgccc
aagtcaggcaaaaccgtgatccaacaacatatcgctcacgcgattaaagcaaatcatcca
gatattaagctgttcgtcttactcattgatgaacgccctgaagaagtcaccgaaatgcaa
cgttccgtggccggtgaggtgattgcgtcaactttcgacgaacccgcttcacgccatgta
caagttgcggaaatggtgcttgaaaaagccaaacgcttagtcgaaatgaagcatgatgtg
gtcatcttgctggattccattacgcgcctagcgcgcgcctataacaccgtggtgccaact
tcaggtaaggttttaacgggtggagtagatgccaatgcgctacaacgtccaaaacgcatc
tttggcgccgcgcgcaatgtcgaagaaggcggctcgctgactatcatcggcacggccttg
attgaaactggcagccgcatggacgatgtgatctatgaagagtttaaaggcaccggcaat
atggaagtccatcttgagcggcgcatggctgaaaaacgcatttatcccgcgatcaatctg
aataaatcaggcacccgacgcgaagagctgctgatcaaaccagaaatcttacaaaagatt
tgggttctgcgtaaatttatccatgatatggatgaagttgaagcattagaatttttgctg
gataaatttaaacagactaaaaacaacgctgaatttttcgatctaatgcgccgcggcgga
taa
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