Mycoavidus cysteinexigens: MCB1EB_1880
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Entry
MCB1EB_1880 CDS
T05801
Name
(GenBank) exoribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mcys
Mycoavidus cysteinexigens
Brite
KEGG Orthology (KO) [BR:
mcys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcys03016
]
MCB1EB_1880
Enzymes [BR:
mcys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MCB1EB_1880
Transfer RNA biogenesis [BR:
mcys03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MCB1EB_1880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BBE10041
UniProt:
A0A2Z6EX67
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All DBs
Position
complement(2268384..2270339)
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AA seq
651 aa
AA seq
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MNIFFEDSGSFKAGTVLSQQNETLQVEGLGGRRIKVKSKDVLLEFSAPSAAALMHSAETC
AQTIELDFLWECAGSDEFNFAVLAEEYFGPQVTSIERAALALRLHSAPVYFRRKGRGHYQ
RAPEEQLKAALAALERRRQQAALQATYEAELKAHRLPAVFEDKVLTFLIKPDKNSIEYKA
VEAAASACGTSVAQLMLDCGALPSARALHESRFLAEHFPQGTGFGPVPETAEPAAEGRCA
ELPVTEIQAFSIDDISTTEIDDAFSVEWLEHGRLRIGVHIAVPALGIARDDMIDLQARTR
LSTVYVPGDKITMLPAELVDRFTLKEGGLRPVLSFYTIVDSATQDIVATETRLEQVFIAH
NLRHNWLDAIVTAEAIAAGEGDYLYKKEIAVLWPFAQALYEKRQAARINYGLKRETQRYT
DFNFAIDGESVSITPRRRGSPLDLIVAELAILVNSSWGAALAKYGVPGIYRAQRSFGANR
TRMQIGPAPHEGLGVEQYAWSTSPLRRYIDLVNQWQLLACTQHGVAAKLVAPFKPKDADL
YVIVQNFEEIYQAYADHQNRMERFWCLRWLKQEKRERMLAAVVKGDLVRFDEIPLLLHVP
GLGVHARDTKLWLDILALDELTLEVSCRLAQVLESSEAQTNLSGDTALSCS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgaacattttttttgaagattccggcagctttaaggccggcactgtactctctcagcaa
aatgaaacgttgcaagtcgaaggactcggcgggcgacggattaaagtaaaaagtaaagac
gttctactcgagttttcggcgccgtcagccgctgcattaatgcactctgctgagacctgc
gcccagactattgaactggattttttgtgggaatgcgcggggagcgatgaatttaacttt
gcggtgctcgccgaggaatattttggcccgcaggtcacctcgattgagcgggccgcgctg
gccctgcgcttacatagcgcgccagtctattttcgtcgtaaagggcgcggacactatcag
cgtgcgccagaagagcaacttaaagccgccttggccgcccttgaacggcgccgccaacag
gccgcgttgcaagctacttatgaagctgaattaaaagcgcatcggctaccagcagttttt
gaggacaaggttctcaccttcttaatcaagccggataaaaattcaatcgaatacaaagcg
gtggaggctgccgccagtgcttgtggcacttcagttgcacaattaatgctcgattgcggc
gctcttccttctgcgcgcgcattgcacgagagccgttttttggcggagcattttccacag
ggtaccggctttggcccagtgcctgaaactgctgagccagcagctgagggccgctgcgcc
gaattaccggtcactgaaatccaagctttctcgatcgatgacattagcacgactgaaatt
gatgacgctttctcggtcgaatggttagaacatggccgcttgcggattggggtgcatatt
gcagtacccgcacttggcattgcgcgggacgatatgattgacttgcaggcgcgcacgcgt
ttgtcgaccgtctatgtgccgggcgacaaaattactatgctgcccgctgagctggtcgat
agatttactttaaaggaaggcgggttaaggccagtcctgtcattctatacaattgttgat
agcgcaacgcaagatattgtggccactgagacgcgcctcgagcaggtatttatcgcgcac
aatctgcgccataattggctggatgcgatcgtaacggcggaggctattgcagcgggcgag
ggtgactatctctataaaaaagagatcgccgtactgtggccatttgcgcaagcgctttac
gaaaagcggcaggcggcccgcatcaattatggactcaagcgcgaaacgcagcgctataca
gactttaatttcgccatcgacggcgaatcagtctcgatcactccgcgccggcgtggctcc
ccgcttgatttgattgtcgctgagttagcgattttggtgaacagcagttggggtgctgca
ttggctaaatacggtgtgccaggaatttatcgggcgcagcgttcatttggcgctaatcgc
acgcggatgcagattggcccagcaccccatgaaggactcggggttgaacaatatgcttgg
agcacttcgccgttgcggcgctatatcgatttagtgaatcaatggcaacttttagcttgt
acgcagcatggcgtggccgctaaattggtggctccatttaagcccaaagatgcggatttg
tacgtgattgtgcaaaattttgaagagatttatcaagcctatgcagatcaccagaaccgc
atggagcgtttttggtgcttgcgttggctcaagcaagaaaagcgcgaacgtatgcttgcc
gcggttgtaaaaggagacttggttaggtttgacgaaatcccgctattgctgcatgtgcct
gggcttggcgtgcatgcgcgcgatactaagctgtggctcgatattcttgcgctagacgag
ctcacccttgaagtttcatgtcgcctagcgcaagtgttggagagtagtgaggcgcagacg
aatctatctggcgacaccgcgctgagctgctcgtag
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