Mycobacterium canettii CIPT 140070017: BN45_60217
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Entry
BN45_60217 CDS
T02422
Symbol
uvrD
Name
(GenBank) Putative ATP-dependent DNA helicase II UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcz
Mycobacterium canettii CIPT 140070017
Pathway
mcz03420
Nucleotide excision repair
mcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN45_60217 (uvrD)
03430 Mismatch repair
BN45_60217 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcz03400
]
BN45_60217 (uvrD)
Enzymes [BR:
mcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN45_60217 (uvrD)
DNA repair and recombination proteins [BR:
mcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN45_60217 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BN45_60217 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCK65401
LinkDB
All DBs
Position
complement(3680060..3682162)
Genome browser
AA seq
700 aa
AA seq
DB search
MSIASDPLIAGLDDQQREAVLAPRGPVCVLAGAGTGKTRTITHRIASLVASGHVAAGQVL
AVTFTQRAAGEMRSRLRALDAAARTGSGVGAVQALTFHAAAYRQLRYFWPRVIADTGWQL
LDSKFAVVARAASRTRLHASTDDVRDLAGEIEWAKASLIGPEEYVTAVAAARRDPPLDAA
QIAAVYSEYEALKARGDGVTLLDFDDLLLHTAAAIENDAAVAEEFQDRYRCFVVDEYQDV
TPLQQRVLSAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDAAVVRLERDYRS
TPQVVSLANRVIAAARGRVAGSKLRLSGQREPGPVPSFHEHSDEPAEAAAVAASIARLIA
SGTPPSEVAILYRVNAQSEVYEEALTQAGIAYQVRGGEGFFNRQEIKQALLALQRVSERD
TDAALSDVVRAVLAPLGLTAQPPVGTRARERWEALTALAELVDDELAQRPALQLPGLLAE
LRRRAEARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAHGPNCEPVEEE
RRLLYVGITRARVHLALSWALSRSPGGRQSRKPSRFLNGIAPQTRADPVPGTSRRNRGAA
ARCRICNNELSTPAAVMLRRCETCAADVDEELLLQLKSWRLSTAKEQNVPAYVVFTDNTL
IAIAELLPTDDAALIAIPGIGARKLEQYGSDVLQLVRGRT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagccagcgacccattgattgccgggctggacgaccagcagcgcgaagccgta
ctggctccgcgcggaccggtgtgcgtgctggccggtgccggaaccggcaagacccgcacc
atcactcaccggatcgcttcgctggtcgcgagcggtcacgtcgccgccgggcaggtgctg
gcggtgacattcacccagcgtgcggcgggcgaaatgcgcagccggttgcgcgcgctcgac
gccgcggcacggaccggttcgggcgtcggcgctgtgcaggcgctgacctttcacgcggcc
gcgtatcgccagctgcggtacttctggccgcgcgtaatcgctgacaccggctggcagctg
ctggacagcaagttcgccgtggtggcccgcgccgccagccgcaccaggctgcacgccagc
accgatgatgtgcgtgacctggccggcgagatcgagtgggccaaggcgtcgctgatcggc
cccgaggagtatgtgaccgcagtggcggccgcacgccgagaccccccgttggacgccgcg
caaatcgcggctgtctactccgaatacgaggcgcttaaggcccgcggcgacggcgtcacc
ttacttgacttcgacgacctgttgctgcacaccgcggccgcgattgaaaacgacgccgcg
gtggccgaggagttccaggaccggtaccggtgtttcgtcgtggacgaataccaggacgtc
acccccctgcagcagcgggtgctctcggcctggttgggtgatcgggacgacctgaccgtc
gtcggcgacgccaaccagaccatctactcgtttaccggcgcttcgcctcgtttcctactc
gacttctcgcggcggttcccggacgccgcggtggtgcgcctggagcgtgattaccggtca
actccgcaggtggtgtcattggctaaccgggtgatcgccgccgcccggggccgtgttgcc
ggcagcaagctacggttgtccggccagcgtgagccgggtccggtcccgtcgttccatgag
cattccgacgagcccgccgaggctgctgcggtggcggcgtcaatcgcccggttaatcgca
tcgggcactccgccatccgaggtagccattctctaccgagtcaatgcgcagtcagaggtt
tatgaagaggcgttgacccaggcgggtatcgcctatcaggtccgcggtggcgaggggttt
ttcaaccgtcaggaaatcaagcaggcgttgcttgccttacagcgtgtgtccgaacgtgat
accgatgccgcgttgtccgacgtggttcgcgcggtgctcgcaccactggggctgacggca
caaccgccggtcggcacccgcgccagggaacgctgggaagcgctcactgcgctggccgag
ctggtcgacgacgagctggcgcagcgtcctgcactgcagctgcccggcctgcttgccgag
ctacgccggcgggcggaggcgcggcacccaccggtggtgcagggcgtcacgctggcctca
ctgcacgccgccaagggactggaatgggacgcggtgttcctggtcggattggctgacggc
acgctgcccatctcgcatgcgctggcacacggccccaattgcgagcccgtagaggaagag
cgtcggctgctctacgtcggaatcactagggcccgagtccatttagcgctcagctgggcg
ctatcacggtccccgggcgggcgccagagccgcaagccctcgcggttcctcaacggcatt
gcgccgcagacgcgcgccgatccggtgccgggcacatcccgacgcaaccggggcgccgca
gcgcgctgccggatctgtaacaacgagctgagcactccggcggctgtcatgctgcggcgg
tgtgagacgtgtgcagccgacgtcgacgaggagttgttgttgcagctcaagtcctggcgt
ctgagcaccgccaaggaacagaacgtccccgcctatgtcgttttcaccgacaacacgctg
atcgcgatcgccgagctgctacctaccgacgacgcggcgctgatcgcgatcccgggcatc
ggtgcccgcaagctggaacaatacggatcggacgtgctgcagctggttcgcggtcggacc
tga
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