KEGG   Mycobacterium canettii CIPT 140070017: BN45_60324
Entry
BN45_60324        CDS       T02422                                 
Symbol
sigF
Name
(GenBank) RNA polymerase Sigma-F factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
mcz  Mycobacterium canettii CIPT 140070017
Brite
KEGG Orthology (KO) [BR:mcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcz03021]
    BN45_60324 (sigF)
Transcription machinery [BR:mcz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BN45_60324 (sigF)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_23 HTH_24 HTH_3 MarR_2 HTH_IclR MarR Sigma70_ECF PF0610-like_N HTH_ParB HTH_20 HTH_31 DUF7343
Other DBs
NCBI-ProteinID: CCK65502
LinkDB
Position
complement(3785465..3786250)
AA seq 261 aa
MTARAAGGSASRANEYADVPEMFRELVGLPAGSPEFQRHRDKIVQRCLPLADHIARRFEG
RGEPRDDLIQVARVGLVNAAVRFDVKTGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPSASELAAELGMDRAEVIEGLLAGSSYHTLSIDSGGGSD
DDARAITDTLGDVDAGLDQIENREVLRPLLEALPERERTVLVLRFFDSLTQTQIAERVGI
SQMHVSRLLAKSLARLRDQLE
NT seq 786 nt   +upstreamnt  +downstreamnt
gtgacggcgcgcgctgccggcggttctgcatcgcgagctaacgaatacgccgacgttccg
gagatgtttcgcgagctggttggtttgcctgccggctcaccggaattccagcggcaccgg
gacaagatcgttcagcggtgcttgccgctggccgatcacatcgcgcggcggttcgagggt
cgcggcgaaccgcgtgacgaccttattcaggtcgcgcgggtcgggctggtcaacgccgcg
gttcgcttcgacgtgaagaccgggtcggacttcgtctccttcgcggttcctaccatcatg
ggcgaggtccgacgacacttccgcgacaacagctggtcggtcaaggttccccggcgtctc
aaggaactgcatctgcggctaggtaccgccaccgccgatttgtcgcagcggctcgggcgg
gcgccgtcggcatcggagctcgccgcggagctcgggatggaccgcgctgaggttatcgaa
ggtttgctggcgggtagttcctaccacaccttgtccatcgacagcggtggcggcagcgac
gacgatgcccgcgcaatcacagacaccctgggcgacgtggatgcgggtcttgaccagatc
gagaatcgggaggtgcttcgtccgttgctcgaggcgttgcccgagcgggaacgaacggtc
ttggtgctcaggttcttcgactcgttgacccaaacgcagatcgccgagcgcgtcggtatc
tcacagatgcacgtatcgcggctgctggccaagtcattggcacggctacgggatcagttg
gagtag

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