KEGG   Mycobacterium canettii CIPT 140070017: BN45_60334
Entry
BN45_60334        CDS       T02422                                 
Symbol
lhr
Name
(GenBank) Putative ATP-dependent helicase Lhr (large helicase-related protein)
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mcz  Mycobacterium canettii CIPT 140070017
Brite
KEGG Orthology (KO) [BR:mcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcz03400]
    BN45_60334 (lhr)
Enzymes [BR:mcz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BN45_60334 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     BN45_60334 (lhr)
DNA repair and recombination proteins [BR:mcz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BN45_60334 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr WH2_Lhr DEAD Helicase_C ResIII AAA_22 AAA_25 PhoH Cas3-like_C_2 DUF6406 GST_C_2
Other DBs
NCBI-ProteinID: CCK65512
LinkDB
Position
3794669..3799210
AA seq 1513 aa
MRFAQPSALSRFSALTRDWFTSTFAAPTAAQASAWAAIADGDNTLVIAPTGSGKTLAAFL
WALDSLASSAPVSERPAATRVLYVSPLKALAVDVERNLRTPLAGLTRLAERQGLPAPQIR
VGVRSGDTPPALRRQLVSQPPDVLITTPESLFLMLTSAARQTLTGVQTVIIDEIHAIAAT
KRGAHLALSLERLDDLSSGRRAQRIGLSATVRPPEELARFLSGQSPTTIVAPPAAKTVEL
SVQVPVPDMANLTDNTIWPDVEARLVDLIESHNSTIVFANSRRLAERLTARLNEIHAARC
GIELAPDTNQQVPGGAPAHVMGSGQTFGAPPVLARAHHGSISKEQRAVVEEDLKRGQLKA
VVATSSLELGIDMGAVDLVIQVQAPPSVASGLQRIGRAGHQVGEISRGVLFPKHRTDLLG
CAVSVQRMLAGEIETMRVPANPLDILAQHTVAAAALEPLDADAWFDTVRRAAPFATLPRS
LFEATLDLLSGKYPSTEFAELRPRLVYDRDTGTLTARPGAQRLAVTSGGAIPDRGLFAVY
LATERPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRG
DDAGRPAELGAALGALTGELAALDRTAFGTRCAGLGFDDYATDNLWRLLDDQRTATAVVP
TDSTLLVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLRDRYGIDEKPTASDNGIVV
RLPDTVSAGEDSPPGAELFVFDADEIDPIVTTEVAGSALFASRFRESAARALLLPRRHPG
RRSPLWQQRQRAARLLEVARKYPDFPIVLETVRECLQDVYDVPILVELMARIAQRRVRVA
EAETAKPSPFAASLLFGYVGAFMYEGDTPLAERRAAALALDSTLLAELLGRVELRELLDP
DVIAATSRQLQHLAADRVARDAEGIADLLRLLGPLTEDEIAARAGAPEVSGWLDGLRAAK
RALAVSFAGRSWWVAVEDMGRLRDGVGAAVPVGLPASFTEAVADPLGELLGRYARTHTPF
TTAAAAARFGLGLRVTADVLGRLASDGRLVRGEFVATAEGSAGGEQWCDAEVLRILRRRS
LAALRAQAEPVSTAAYGRFLPAWQHVSAGNSGIDGLAAVIDQLAGVRIPASAIEPLVLAP
RIRDYSPAMLDELLASGDVTWSGAGSISSSDGWIALHPADSAPMTLAEPAEIDFTDAHRA
ILASLGSGGAYFFRQLTHDGLTEAELKAALWELIWAGRVTGDTFAPVRAVLGGAGTRKRA
APAHRGHRPPRLSRYRLTHAQARNADPTVAGRWSALPLPEPDSTLRAHYQAELLLNRHGV
LTKGAVATEGVAGGFATLYKVLSAFEDAGRCQRGYFIESLGGAQFAVASTVDRLRSYLDG
VDPERPDYHAVVLAAADPANPYGAALPWPASSADGTARPGRKAGALVVLVDGELAWFLER
GGRSLLTFTDDPEANHAAAIGLADLVTAGRVASILVERADGMPVLQPGGRASAALTALLA
AGFVRTPRGLRRR
NT seq 4542 nt   +upstreamnt  +downstreamnt
gtgaggttcgcgcagccttcagcactgagccgattcagcgcgctcacccgagactggttc
accagcactttcgccgcgcccaccgccgcccaggccagcgcctgggccgccatcgcagac
ggcgacaacacgctggtcatcgcgcccaccggatccgggaagaccctggcggcgttcctg
tgggccctggatagcttggccagttcggcacctgtgtccgagcggccggcggccacccgc
gtgctgtatgtgtcgccgctcaaggcgttggccgtcgacgtcgagcgcaacctgcgcact
ccgctggccgggctgacccgactcgccgaacgccagggtctgcccgcgccccagatcagg
gtgggcgtccgttcgggcgacaccccgcccgcacttcgccgccagctcgtcagccagccg
cccgacgtgctgatcaccaccccggagtcactgtttttgatgctcacttcggccgcacgc
cagactctgaccggtgtgcagaccgtcatcatcgacgaaattcatgccatcgccgccacc
aaacgcggcgcgcacctggcactatctctagaacggctcgacgacctgtctagcgggcga
cgggcgcagcgcatcgggctgtctgcgaccgtacgtcctcccgaggaactcgcaaggttc
ctgtccggacagtccccgacgaccattgtggcgcccccggccgccaagaccgttgagctg
tccgtgcaggtgccggtgcccgacatggccaacttgaccgacaacaccatctggccagat
gtggaggctcggctggtcgacctgatcgaatcgcacaactcgaccatcgtgttcgccaat
tcgcgacgattagccgagcgacttaccgcacggctcaacgaaattcacgccgcgcgctgc
gggattgagctcgcgccagacaccaaccagcaggttcccggcggcgccccggcgcacgtt
atgggctcgggccagacgttcggcgcgccgccggtgctggcccgcgcccaccacggctcg
atcagcaaggagcagcgcgccgtcgtcgaagaggacctcaaacgcgggcaactcaaagcg
gtggtggcgacgtccagcctggagctgggcatcgacatgggcgcggtcgatctggtgatc
caggtacaggcaccaccatcggtggccagcgggctgcagcgcattggccgggccggtcat
caggtcggcgagatttcgcgaggggtgctgtttcccaagcaccgcaccgacctactgggc
tgcgcggtcagcgtgcagcgcatgcttgccggtgagatcgagaccatgcgggtgccggcc
aacccactcgacattctggcccagcacacggtggcggcggccgcgctggaaccgttggat
gccgacgcgtggttcgacaccgtgcggcgggccgccccgttcgcgaccctgccgcgcagc
ctgttcgaggccaccctggacctgctgtccggcaagtacccatccaccgagttcgctgag
ctgcggccgcggctggtgtatgaccgcgataccggcacgctgaccgcgcgacccggagcc
cagcgactggccgtcacctccggcggcgccattcccgatcgcgggttgttcgccgtctac
ctcgctaccgagcggccgtcgcgggtaggcgaactcgacgaggaaatggtttacgagtcc
cgccccggtgacgtgatctcgctgggtgccaccagctggcgaatcaccgagatcacccac
gaccgggtgctggtgatccccgcgccgggccagccggcccgattgccgttctggcgcgga
gacgatgccggccgccccgccgagctcggcgccgcactcggcgccctcaccggcgagctg
gccgccctggaccgtacggcattcggcacacgttgtgcgggtttgggtttcgacgactat
gccaccgacaacctgtggcggctgctggacgaccaacgcaccgctaccgcagtggtaccc
accgacagcacattgttggtcgagcggtttcgtgacgagctgggcgattggcgggtgatc
ttgcattcgccgtatgggctgcgggtgcacggaccgctcgcgctcgcagtcggccggcgg
ctgcgcgaccgctacggcatcgacgagaagccgaccgcctccgacaacggcatagtggtg
cgcctaccggacaccgtgtccgctggcgaagacagcccgccgggtgccgaactgttcgtt
ttcgacgccgacgagatcgacccgatcgtcaccaccgaagtggccggttcggcgctgttc
gcgtcacggttccgggaatcggcggcccgggctctgctgctgccccgccggcaccccggc
cgtcgctcgccgctgtggcagcagcggcagcgcgccgcccggctgttggaagtggcccgc
aaataccccgacttcccgattgtgctggagaccgtccgcgagtgcctgcaggacgtctat
gacgtcccgatcttggtcgagctgatggcgcgaatcgcccagcggcgggtgcgtgtcgcc
gaagccgagaccgccaaaccctcgccatttgcggcatcgctgttgttcggctacgtcggc
gccttcatgtacgagggcgataccccgctggccgaacggcgcgccgccgcgctcgcgctg
gacagcacgttgctggccgagctgctaggccgggtggagctgcgtgagctgctcgatcct
gacgtcatcgccgctaccagccgccagctccagcatctggcggccgaccgggtagcccgt
gacgccgaagggattgccgatctgctgcggctgctgggtccgctcaccgaagacgagatc
gctgcccgggcgggcgcgcccgaggtcagcggctggctggacggcttacgcgccgccaaa
cgcgcgctcgcggtgtccttcgccggacgcagctggtgggttgccgtcgaggacatgggc
cggctgcgcgacggcgttggcgcggcggttccggtggggctgccggccagcttcaccgag
gcggtagccgacccgctgggcgaactactgggccgctacgcacgcacccacacaccgttc
accaccgctgcagccgcagcccggttcggtcttgggctgcgggtgaccgccgacgtgctg
ggccggctggccagcgatggccggctggtgcgcggcgaattcgtggccacggccgaagga
tccgccggcggcgagcagtggtgtgacgccgaggtgttgcgaattctgcggcgccgctcg
ctggccgcactgagggcgcaggcagagccggtcagcaccgccgcctacgggcgcttcctg
ccggcctggcagcacgtttccgcgggcaactcgggcatcgacgggctggccgcggtcatc
gatcagctcgccggcgtccggataccggcctcggcgatcgaaccgctggtgctcgcccca
cggatccgcgattactcgccggcgatgctcgacgagctgctcgcgagcggggacgtcacc
tggtcgggcgccgggtcgatctcaagcagtgacggctggatcgccctgcaccccgccgac
tcggcgcccatgacgctggcggagccggccgaaatcgacttcaccgacgcccaccgggcg
atcttagccagcctgggcagtggcggcgcgtacttcttccgccagttgacccacgacggc
ctgaccgaggcggaactcaaagcagctctgtgggaattgatttgggccggacgagtgacc
ggcgacacgttcgcaccggtacgcgcggtactcggcggggcgggcacccggaagcgtgct
gctcccgcacaccgcgggcatcgaccgccgcgcctgagcaggtaccgcctcacgcacgcc
caggcccgcaacgctgacccgaccgtcgccgggcggtggtccgcgctgccgcttcccgag
ccggactccacgctgcgcgcccattaccaagccgagctgctgttgaaccgccacggcgtg
ttgaccaagggcgcggttgccaccgagggtgtggcgggcgggttcgcgacgctctacaag
gtgctcagtgcgttcgaggatgccggcaggtgccagcgtggctacttcatcgagtcgttg
gggggcgctcagttcgccgtcgcctcgaccgtagaccggctgcgtagctacctcgatggt
gtcgaccccgaacggccggactaccacgcggtggtgctagccgctgccgacccggccaac
ccgtatggggcggcgttgccctggccagcgtcgagcgctgacggtaccgcccggccgggc
cgcaaagccggagcactggtcgttctggtggacggcgagttggcctggttcctcgagcgc
ggcgggcggtcgttgctgacgttcaccgatgatcccgaggccaaccacgcggcggccatc
gggctggccgacctggtcaccgccgggcgcgtcgcgtcgattctggtcgagcgggccgac
ggcatgccggtgctgcagcccggcgggcgggcgtcggcggcactgacggcgctgctggca
gccggctttgtccgcacgccgcgcggtctgcggcggcggtag

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