Mongoliitalea daihaiensis: IPZ59_09110
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Entry
IPZ59_09110 CDS
T07844
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mda
Mongoliitalea daihaiensis
Pathway
mda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IPZ59_09110 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mda03021
]
IPZ59_09110 (rpoC)
03400 DNA repair and recombination proteins [BR:
mda03400
]
IPZ59_09110 (rpoC)
Enzymes [BR:
mda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IPZ59_09110 (rpoC)
Transcription machinery [BR:
mda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IPZ59_09110 (rpoC)
DNA repair and recombination proteins [BR:
mda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IPZ59_09110 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
UJP66720
LinkDB
All DBs
Position
2132762..2137072
Genome browser
AA seq
1436 aa
AA seq
DB search
MAFRKNKKLNNDFSRVTISLASPESILDSSHGEVTQPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFKSLPNKI
GYLLGLPTKKLDQIVYYERYAVVQAGIKAEDGIQYLDFLTEDEYLDIMDKLPKENHMLDD
DDPNKFIAKMGAEAIEMLLARLDLDDLSYSLRHQAATDTSQQRKAEALKRLKVVEAFRDA
RTRIENRPEWMVVRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIDIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRADGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKNMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDP
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGHEAILEASTLMLSSHNILNPANGAPITVPSQDMVLGLYYVTKGKKSTPEEIVD
GEGMTFYGEEEVIIAMNEGQVSKHAHIKCKVKVRNEDGTIAEKIIDTVAGRLIFNQFVPE
EVGFVNELLTKKKLQQIISEVVKICGVARTAQFLDDIKHLGFQMAYQGGLSMGLNDVIIP
EAKDTLVNKAKEEVEQISSNYYMGLITDNERYNQVIDIWTRTNSNLTNILMKQMEEDKQG
FNAIYMMMHSGARGSREQIRQLGGMRGLMAKPQKNLQGSVGEIIENPILSNFKEGLDVLE
YFISTHGARKGLADTALKTADAGYLTRRLVDVAQDMIISEEDCGTLRGLVVSALKDNDEI
VEPLSERILGRVSVHDVYDPISEELLIPSGIEITEEIAKRVDESAIDEVEIRSVLTCETR
RGVCGKCYGRNLATGAMVQAGESVGVIAAQSIGEPGTQLTLRTFHVGGTASNMAVDASIN
AKFDGVVEFEEELRWIETTNKDGEKISIVMGRSGEIRINDAKSGKTLVSNHVPYGAILNV
QDGQKIAKGDSLCTWDPYNAVILSEFDGEVEFDAIIEGITFKEVADDQTGFREKVIIDTK
DKTKNPAVVVNYGEESKGYNIPVGAHLAVEAGEKVKAGQILVKIPRSVGKTRDITGGLPR
VTELFEARNPSNPAVVSEIDGVVTYGGIKRGNREIFIESRDGVRKRYMVSLSKHILVQEN
DFIRAGEPLSDGAITPNDILSIKGPTAVQEYLVNEIQEVYRLQGVKINDKHIEVIVSQMM
QKVEILDAGDTNFLQNQVVDKWAFREENDNILDKKVVMDAGDSSTLKPGMIITSRRLRDE
NSSLKRKDLKLVQVRDAETAVSKPTLQGITAASLGTESFISAASFQETTKVLSEAAIRGK
RDELLGLKENVIVGHLIPAGTGQRKFQSMIVGSLEEMDRMTNERDRTAKKSKEAVK
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagaaaaaacaaaaaactaaacaacgacttctccagagtcaccattagtttg
gcctctccagaatccattctggatagttcacacggtgaagtaacgcagcccgaaacaatc
aattacagaacctataagcctgaaatggggggattgttctgtgagcgtattttcggtcct
gtgaaagattgggagtgtcattgtggtaagtacaagcgcataagatacaagggcattatc
tgtgaccgttgtggtgttgaagtgactgaaaagaaagtaagaagagagcgtatgggccac
atcgaattggtggtgcctgtagcgcatatctggtacttcaagtcgcttccaaacaaaatc
ggttacttgttaggtttgcctaccaagaaattggatcaaattgtttattacgaaagatac
gctgttgttcaagctggtatcaaggcagaagacggcattcagtacctagattttttgact
gaagatgagtatttggacatcatggacaagcttccgaaggaaaatcatatgcttgatgat
gacgatccaaataaattcatcgccaaaatgggtgcagaagcgattgaaatgcttttggct
cgtttggatttggatgatctatcctacagcttgagacatcaggcagctaccgatacttct
cagcagagaaaagcagaagcattgaagcgtttgaaagttgtagaagcttttagagatgca
agaacacgtattgaaaatcgtccagagtggatggtcgttcgtatggttcctgtcattcca
ccagaattgagaccattggttcctttggatggaggtcgttttgcaacttccgatttgaac
gatttgtacagaagagtaatcatccgtaacaaccgtttgaagcgtttgattgatatcaaa
gcgccagaagtaattttgagaaatgagaaaaggatgttacaggaagctgtagattcttta
tttgataactcaagaaaagtaaatgctgtaagagcagatggtaaccgagccttgaaatca
ctttccgatatgttgaaaggtaagcaaggtcgtttccgtcaaaacttgttagggaagcgt
gtggattactccggacgttctgtaatcgtcgtaggtcctgaattgaaactacacgagtgc
ggtcttcctaaaaatatggcagctgagcttttcaagccgttcatcattcgtaagttgatt
gaaagaggcattgtaaagacagttaagtctgcgaagaaaattgttgatagaaaagatcct
gtagtttgggatatcttggagaacgtgttgaaaggacaccctgtgttgcttaaccgtgcc
ccaacgcttcacagactagggattcaggctttccagcctaagttgatcgaaggaaaagcg
attcagttacatccattggtatgtactgcattcaacgctgactttgatggtgaccaaatg
gcggtacacgtaccgttgggtcatgaggcgattttggaagcttccaccttgatgctatct
tctcacaatatcttaaaccctgcgaatggtgcaccgattacggtaccttctcaggacatg
gttttgggtctttactacgtaaccaaaggaaagaaatcaactcctgaagagattgtggac
ggtgaagggatgaccttctacggtgaagaagaggtcatcatcgcaatgaatgaaggacaa
gtttctaagcatgctcacatcaagtgtaaagtgaaggtgagaaatgaagatggaacgatt
gcagaaaaaattatcgatacagttgcaggacgattgattttcaatcagtttgtgccagaa
gaggtaggttttgtaaacgagttgttgacgaagaaaaagctacaacaaatcatctctgaa
gtagtgaagatttgtggtgtagctagaacagctcaattcttggatgatatcaaacacctt
ggattccaaatggcttatcaaggcggactttcaatgggtctgaatgatgtaattatcccg
gaagcaaaagataccttggtaaataaggctaaagaagaggtggagcaaatctccagcaac
tactacatgggtcttattacagataacgagcgttacaatcaagtaattgatatctggaca
agaactaactccaatttgacaaacattttgatgaagcaaatggaggaggataagcaagga
tttaatgctatctacatgatgatgcactctggagctagaggttctagagagcagatccgt
cagttgggtggtatgagaggtttgatggctaagccacaaaagaacttgcaaggttccgtt
ggtgagatcattgaaaacccaattctatccaactttaaagaaggattggatgtattggaa
tactttatctctacacacggtgctcgtaaaggtcttgcagatacagcattgaaaactgcc
gatgcgggttacctaacccgtcgactggtggatgttgctcaggatatgattatctctgag
gaggattgcggtactttgagaggtttggttgtttctgcattgaaagacaatgatgagatt
gtggagccactttctgagcgtatccttggtagagtatctgtccacgatgtgtacgatccg
atttccgaagaattattgatcccatcaggtatcgaaattacagaagaaattgctaagaga
gtagatgagtcagctattgacgaagttgaaatacgttctgttcttacctgtgagacccgt
agaggtgtttgcggtaagtgttatggacgtaacttggctaccggagccatggttcaggca
ggtgagtctgtgggtgtaattgccgcacagtctatcggtgagccaggtacacagttgacc
ttgagaacattccacgttggtggtactgcttctaacatggcggttgatgcgagcatcaac
gctaagtttgacggggtagttgaattcgaagaggaattgagatggatcgaaactaccaac
aaagatggagagaaaatctctatcgtcatgggtagatcaggtgaaatcagaatcaacgat
gcgaagtctggcaaaacacttgtgtctaatcacgtgccttacggtgcgatcttgaatgta
caggatggtcagaaaattgcaaaaggcgattctttatgtacttgggatccatacaatgcg
gttattctttccgaatttgatggagaagtggagtttgacgcgatcatagagggcatcacc
tttaaggaagttgccgatgatcaaacaggctttagagaaaaagtaatcattgatacaaaa
gataaaactaagaatccagcggtagtagttaactatggtgaggagtctaaggggtataac
attccagtaggagctcacttagctgttgaggcaggtgaaaaagtgaaagctggacaaatc
ttggtgaaaatcccacgttctgtaggtaaaactagagatatcacgggtggtctaccacga
gtgacagaattgtttgaggcaagaaacccatccaatccagcggtggtttctgaaatcgac
ggtgtggtaacttatggtggtatcaagcgaggtaaccgtgaaatcttcattgaatccaga
gatggtgttagaaagcgttacatggtttcactttccaagcatatcttggttcaggaaaat
gactttatcagagctggtgagccattatccgatggtgccatcactccaaacgatatccta
tccatcaaaggaccaactgctgtgcaggaatacttggtgaatgagattcaggaagtttac
agattgcaaggtgtgaagatcaacgataagcacatcgaagtaattgtaagtcaaatgatg
caaaaagtagagatcttggacgcaggtgatactaatttcttgcaaaatcaagtagttgat
aaatgggcattcagagaagaaaacgataatatcctagacaaaaaagtggttatggatgca
ggagattcttctaccttgaagccagggatgatcattacttccagaaggttgagagatgaa
aattccagcttgaagcgtaaggatttgaaattggtacaagtaagagatgctgaaactgcc
gtttccaagccaaccttgcaaggtattactgctgcatcattgggtacagaaagctttatt
tcagcagcatccttccaggagacgacgaaggtgttgagtgaggcagctatccgaggtaag
cgtgatgagctattgggtctgaaagaaaacgtaattgtaggtcatttgatccctgcaggt
acaggtcagcgtaagttccaaagcatgatcgtaggatcattggaggagatggaccgcatg
acaaatgaaagagaccgtacagcaaaaaaatccaaagaggctgttaaataa
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