Mongoliitalea daihaiensis: IPZ59_11595
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Entry
IPZ59_11595 CDS
T07844
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mda
Mongoliitalea daihaiensis
Pathway
mda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPZ59_11595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mda03019
]
IPZ59_11595
03009 Ribosome biogenesis [BR:
mda03009
]
IPZ59_11595
Enzymes [BR:
mda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IPZ59_11595
Messenger RNA biogenesis [BR:
mda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPZ59_11595
Ribosome biogenesis [BR:
mda03009
]
Prokaryotic type
rRNA helicases
IPZ59_11595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Mnd1
UTP25_NTPase-like
Cas3-like_C_2
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
UJP63487
LinkDB
All DBs
Position
2755981..2757729
Genome browser
AA seq
582 aa
AA seq
DB search
MEKELLFSDLGVSAEILKAVEDMGYTHPSTIQTQSIPLLLSGRDVIGQAQTGTGKTASFA
IPIIDQIDVSFNKPQALILCPTRELAVQVEGEIVKLAKYKRGLSSTCIYGGEAIDRQIKS
LRKGVQIVVGTPGRIMDHMERGTLKLEHVGMIVLDEADEMLDMGFRDDIERILSDCPDER
QTVFFSATMAKPILDLTKKYQNNPEIVKVLRKELTVENISQVYYEVKSPLKLELMSRLIN
LNQFALSVVFCNTKRTTDEVTEELIARGIMAEALHGDLSQAQRSKVMAKFRKGHVSVLVA
TDVAARGIDVDNVEAVFNYDLPLDEENYVHRIGRTGRAGKSGAAISFATGRKDMFKLRDL
EKFIKTSITKMSPPSVKDLIQLKKDQLIKDVYTQLSKEDDNSFYEETIGQMLAEGLTMEQ
VMMGLIKIQMADAVHEMEDQNFEIDLGRERSSRERTERGGRERDRSERGSRPERGARRER
TERSERSGDRPERRGSREKAVREPGMARLFINLGKKDRVRPNDIVGAIAGESGVSGRSIG
GIDIFDNFSFVDVPSKDADHIIKVMKNNTIKGKTVNMEISKG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaattattattctcagaccttggggtatccgcagagatccttaaggcagta
gaagatatgggctatacccatccttctaccattcaaacacaatctatccctttgttgctt
agcgggcgtgatgtcattggacaggcgcaaactggaactggtaagacagcttcttttgct
attcctatcattgatcaaatagatgtgtctttcaacaagcctcaggcgcttattttatgt
cctactcgtgaacttgctgtacaagtagaaggagagatcgtaaaattagctaaatataaa
agaggtctttcttccacttgtatttacggtggagaagcaatcgacaggcaaatcaaatcc
ttaagaaaaggagttcagattgtagtcggtacaccaggccgtatcatggatcacatggag
cgtggtacactaaaactggaacacgtaggtatgatcgtgttggacgaagcggatgaaatg
ttggatatgggtttcagagacgatatcgaaagaatcttgagcgactgtccagatgaaaga
caaacggtatttttctctgccacgatggctaagcctatcttggatttgactaagaaatat
caaaataatccggaaatcgttaaggttttaagaaaagaactaacggtagaaaatatctct
caagtatattatgaggtgaagtccccattgaagcttgagttgatgtctcgattaattaac
ttaaatcagtttgctttaagtgttgtattctgcaacacaaagcgtacaacagatgaagta
acagaagagttaattgcaagaggaatcatggctgaagctttgcacggagatttatcccaa
gcacagcgaagcaaagtgatggctaaattccgtaaaggtcatgtatctgtattagttgct
acggatgtagcggcaagaggtatagatgtagacaacgtagaagcagttttcaactacgat
ttgccattggatgaggaaaactacgtacacagaatcggaagaacaggtcgtgctggtaag
tctggagctgctatcagttttgcaactggtagaaaagacatgttcaaattgagagatttg
gaaaagtttatcaagacttctatcaccaaaatgtctcctccgagcgtcaaggatttgatc
caactgaagaaggatcaattgataaaggatgtgtatacgcaattgagcaaggaagatgac
aatagtttctatgaagaaaccattggtcaaatgcttgctgaaggcttgacaatggaacaa
gtgatgatgggattgatcaaaatccaaatggctgatgctgttcatgagatggaagatcaa
aactttgaaattgatcttggaagagagcgaagcagcagagagcgtactgagcgtggtgga
agagaacgtgatcgttctgaaagaggtagcagaccagaaagaggtgctcgtcgtgagcga
actgagcgttctgaaagaagcggggatcgtcctgaaagaagaggttcaagagaaaaagca
gttagagagccgggaatggcgcgactatttatcaatctaggtaaaaaagaccgtgtacgt
cccaatgatattgtaggtgctattgctggagaatcaggtgtttctggtagaagtatcgga
gggattgatatctttgataacttctcatttgtagatgtgccatccaaggatgcggatcat
atcatcaaagtgatgaaaaataataccatcaagggcaaaaccgtaaatatggaaatctcc
aaaggctaa
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