Mongoliitalea daihaiensis: IPZ59_17740
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Entry
IPZ59_17740 CDS
T07844
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mda
Mongoliitalea daihaiensis
Pathway
mda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPZ59_17740 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mda03019
]
IPZ59_17740 (recQ)
03400 DNA repair and recombination proteins [BR:
mda03400
]
IPZ59_17740 (recQ)
Enzymes [BR:
mda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPZ59_17740 (recQ)
Messenger RNA biogenesis [BR:
mda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPZ59_17740 (recQ)
DNA repair and recombination proteins [BR:
mda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IPZ59_17740 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UJP64621
LinkDB
All DBs
Position
4181409..4183589
Genome browser
AA seq
726 aa
AA seq
DB search
MDQIVKDNLKKIFGFSQFRGNQEGIVDNILKNHNTFVIMPTGAGKSLCYQLPAVSKEGTA
IVISPLIALMKNQVDQLTAFGISAHFLNSTLNKSETNKVKKEVISGKTKLLYVAPESLTK
EENIEFLKEANISFVAIDEAHCISEWGHDFRPEYRKIKSIIAQVGANLPIIALTATATPK
VQQDIQRNLHMEEADLFKSSFNRTNLYYEIRPKLKNETKKQIIKYIKTHKGKSGIIYCLS
RKKVEEIAELLKVNGINAAPYHAGLDQSVRIKNQDDFLNEELDVIVATIAFGMGIDKPDV
RYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYEDIVKLEKFNKDKPVTERENAKI
LLDEMAAYAESSVCRRRVLLHYFGEIVEEDCGFCDNCKKSKEKFEGIDYLLTAVQAVKDI
NGRFNLKHIVDIIRGEHNDYMVSYGHDQLAVFGKGKEEDERLWKSVVRQAMYFNFLEKDI
ENYGLIKITEKGRQYLDSPYDVTLSKDHNYEDEINNSESLEDVPTAGKSYDENLFELLKA
ERKKVAKAKGLPPYVIFQDPSLEEMATVYPTTKEELAQINGVGMGKVAKFGVSFLKLIEN
YVEENDIITASDVVVKTSGSRSKVKISIIQQVDRKIDLDEIASNLNISMTELLQEIEQII
YSGTKLNINYYIEHIMDEEKEDILQEYFMTAESDNIRVALEELEEEEIDEEEIRVYRIKF
ISDHAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaatcgtaaaagataatttaaaaaaaatatttggtttcagccagtttcgggga
aaccaagaaggaattgtagataacatcctgaagaatcataatacttttgtcatcatgcct
acaggagctggaaaatccctgtgttaccaattgcccgctgtatctaaggaaggaactgct
attgttatatctcccttaattgccttgatgaaaaatcaagtggatcagctgacagccttt
ggtatcagtgctcactttttaaattctacgctcaataaatctgagaccaataaggtcaaa
aaagaagtaatttcgggtaaaacaaaactgctatatgtagctcctgaatcacttaccaaa
gaggaaaatattgaatttctaaaagaagccaatattagttttgttgccattgatgaagca
cactgtatttctgaatggggccatgattttaggccagagtacagaaaaataaaatccatc
attgcccaagtaggagctaacctcccgatcatcgcacttacggctacagcaaccccaaaa
gtgcaacaagacattcagcgaaaccttcatatggaagaagctgatctttttaaatcctct
tttaacagaaccaatctgtattatgaaattcgtcccaagctcaaaaatgagacgaagaag
cagatcatcaagtatatcaaaacccataaaggaaaatcaggaatcatctattgtctcagt
agaaaaaaagttgaggaaatagcagaattactcaaggttaacggcatcaatgctgctcca
tatcacgcagggctagatcaaagtgtacggatcaaaaatcaagatgatttcctcaatgaa
gaattggatgtaattgttgccaccatcgcttttggtatgggtattgacaaacccgatgtg
cgttatgtcattcactacgatgtcccaaaatcacttgagggatattatcaggagactggt
agagctggaagagatggtttagaggggcattgcctcatgttttacaaatatgaggacatc
gtcaagcttgaaaaatttaataaagacaaaccagtcaccgaacgggaaaatgctaaaatt
ttactcgatgaaatggctgcctatgcagaaagctccgtttgccgcagaagagtcctatta
cattatttcggggaaatcgtagaagaagactgcggtttttgtgacaactgtaaaaagagc
aaagaaaaatttgaaggaattgactatttattaacagcggtgcaggctgtaaaagacatc
aatggtagatttaatctcaagcacatagtcgatatcattcgaggagagcataatgattat
atggtcagttatggtcatgatcaattagctgtttttggaaaaggaaaagaggaggacgag
cgcttatggaaatctgtagtccgtcaggcgatgtatttcaactttctagaaaaggatatt
gaaaattacggattgattaaaatcactgaaaaagggcgtcaatacttggattccccgtat
gatgtcaccttgagtaaagatcataactacgaggacgagatcaacaacagtgaatctctt
gaagatgtgcctaccgcaggaaaatcttacgatgaaaatctttttgaattgctcaaggcc
gaacggaaaaaggtcgctaaagcaaaaggacttcctccttatgttattttccaggatcct
tccttggaagaaatggctactgtatacccaaccactaaagaagaacttgcacagatcaat
ggtgtgggaatggggaaagtcgctaaatttggagtatcatttcttaaattgattgaaaat
tatgtagaagaaaatgacatcatcacagcatctgatgtggtagtcaaaacttctggaagc
agatccaaagtaaaaatttctatcattcaacaagtggatagaaaaattgatcttgatgag
attgcttccaatttgaatatctcaatgacggagctattgcaagaaattgagcaaattatc
tacagtggcaccaaattgaatatcaattattacatcgagcatatcatggatgaagaaaaa
gaagatattcttcaggaatatttcatgacagccgaatctgacaatatacgcgtggcacta
gaagaattagaggaagaggaaattgatgaggaagaaatcagagtttacagaatcaaattt
atttctgaccacgccaactaa
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