Microcella daejeonensis: OVN18_00445
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Entry
OVN18_00445 CDS
T09552
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mdb
Microcella daejeonensis
Pathway
mdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OVN18_00445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdb03019
]
OVN18_00445
Messenger RNA biogenesis [BR:
mdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OVN18_00445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF1732
Motif
Other DBs
NCBI-ProteinID:
WAB81532
UniProt:
A0A9E8SBF8
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All DBs
Position
complement(85269..86945)
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AA seq
558 aa
AA seq
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MPHAIEDAPALAPGALRVIPLGGLGEIGRNMAVFELDGKLLVVDCGVLFPEEHQPGVDLI
LPDFSPIRDRLDDIVAVVLTHGHEDHIGAVPYLLRLRSDIPLIGSTLTLALIEAKLKEHR
IQPYTLAVKEGQTEKLGPFDLEFVAVNHSIPDALAVAIHTVAGTVLHTGDFKMDQLPLDR
RITDLRAFARLGERGVDLFMTDSTNADVPGFTARERDIGPVLESVIAKAPRRVIVASFSS
HVHRVQQVVDAAAANGRKVAFMGRSMVRNMTIAAELGYLTVPEGILIDHRKAKDLPDDRI
VYMSTGSQGEPMAVLARMANMDHQVEVGEGDTVILASSLIPGNENAVYRVINGLIALGAN
VVHKGNAKVHVSGHASAGELVYCYNIVRPKNVMPVHGEARHLYANQQLAIETGVPERNTI
IAGNGTVVDLQHGVARIVGQLDLGEVYVDGSSVGTITDADLKDRRVLAEEGFISIFVAVD
AQTGRPVVGPEIHARGFAPDESIFDEVVPQVVKALREAAENGTRDAHGFSQVVRRTVGRW
VNTKHRRRPMIVPVVITA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgccccacgccatcgaagacgcccctgccctcgcgcccggagcgctgcgcgtcatcccc
ctcggcggtctcggcgagatcggccgcaacatggccgtcttcgagctcgacggcaagctg
ctcgtcgtcgactgcggcgtgctcttccccgaggagcaccagcccggcgtcgacctgatc
ctgcccgacttctcgcccatccgcgatcggctcgacgacatcgtcgccgtcgtgctcacg
cacggccacgaggaccacatcggcgccgtgccgtacctgctgcgcctgcgcagcgacatc
cccctcatcggctcgacgctcacgctcgccctcatcgaggcgaagctcaaggagcaccgc
atccagccgtacacgcttgcggtgaaggaggggcagaccgagaagctcggccccttcgat
ctcgagttcgtcgcggtcaaccactccatccccgatgcgctcgccgtcgcgatccacacg
gtcgccggcacggtgctgcacacgggcgacttcaagatggaccagctgccgctcgaccgc
cgcatcaccgacctgcgcgccttcgcccgcctgggcgagcgcggcgtcgacctcttcatg
accgactccacgaacgccgacgtgccgggtttcaccgcccgcgagcgcgacatcggcccc
gtgctcgagagcgtcatcgccaaggcgccgcgccgcgtcatcgtcgcgagcttctcgagc
cacgtccaccgcgtgcagcaggtcgtcgacgccgcggccgcgaacggccgcaaggtcgcc
ttcatgggccgctcgatggtgcgcaacatgaccatcgccgccgagctcgggtacctgacg
gtgccggagggcatcctcatcgatcaccgcaaggcgaaggacctgcccgacgatcgcatc
gtctacatgtcgacgggctcgcagggcgagccgatggccgtcctcgcccgcatggcgaac
atggaccaccaggtcgaggtcggcgagggcgacacggtcatcctcgcctcgagcctcatc
ccgggcaacgagaacgccgtctaccgcgtcatcaacggcctcatcgcgctcggggcgaac
gtcgtgcacaagggcaacgcgaaggtgcacgtctcgggccacgcctcggcgggcgagctc
gtgtactgctacaacatcgtgcgcccgaagaacgtcatgcccgtgcacggcgaggcccgg
cacctctacgccaaccagcagctggccatcgagaccggggtccccgagcgcaacacgatc
atcgccggcaacggcacggtcgtcgacctgcagcacggcgtcgcccgcatcgtcggccag
ctcgacctcggcgaggtctacgtcgacggctcctcggtcggcacgatcacggacgccgac
ctcaaggaccgccgggtgctcgcggaggagggcttcatctcgatcttcgtggcggtggat
gctcagaccggccgccccgtcgtcggccccgagatccacgcccgcggcttcgcccccgac
gagagcatcttcgacgaggtcgtgccgcaggtcgtcaaggccctgcgcgaggcggcggag
aacggcacgcgcgacgcgcacggcttcagccaggtcgtgcgccgcacggtcggccgctgg
gtcaacacgaagcaccgccgtcgcccgatgatcgtgccggtggtcatcaccgcgtag
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