Musca domestica (house fly): 101889347
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Entry
101889347 CDS
T03448
Name
(RefSeq) collagen alpha-1(I) chain
KO
K19719
collagen type II alpha
Organism
mde
Musca domestica (house fly)
Pathway
mde04512
ECM-receptor interaction
mde04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101889347
04518 Integrin signaling
101889347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mde00536
]
101889347
Glycosaminoglycan binding proteins [BR:
mde00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101889347
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC_Sas
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
101889347
NCBI-ProteinID:
XP_005179626
UniProt:
A0A1I8MSK9
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MHFKLFWLLITACVLIAAVTAAAEETKDAPKNAAKNVKKARLRKKIVERPQAEEPKPDDA
SLDDLDNYDYSNYDDDLGSDVDTFEAHGVEVASSTATPRMASNVINAFSCFFEGNWYRDN
DEFTTEQNNCVHNCICREGKVDCTPSADCKLGLGPAIDLQPLDEIPTTTPKPVTPATTPA
YNPYEAALGPRGEPGYPGAQGPSGEAGFPGAPGTPGVPGNPGPPGPMPDMSYYHQQLAAE
YANSDKGPTAAAFYAPVPIPTNGQPGPRGPPGTVGPQGPQGFQGTRGEPGEPGVQGPPGP
MGPRGLPGPPGKDGMPGEDGEPGPQGLAGTPGPRGLPGLPGQPGLKGHRGLPGLDGSKGD
MGAPGEKGSAGVMGPVGPPGSTGPAGPRGERGREGPPGQPGARGLDGNPGTPGQPGAIGK
PGPPGFPGIPGAKGDMGHMGPKGDQGLQGPRGEAGRPGATGENGLPGLPGKDGMPGDKGS
MGAPGIAGPQGFPGPRGPDGMPGSPGEPGVKGAAGQPGERGYKGDQGIKGEAGQPGPRGL
PGTVGPEGKRGKRGMRGPTGPAGPTGERGSPGMPGLPGPDGPMGPKGTPGERGVQGPPGE
KGSNGDIGPPGLPGLQGLRGLPGRVGPDGRDGPPGERGPPGADGKPGEQGLQGLQGLPGP
MGIPGDKGIPGEPGKAGEPGVAGPPGPRGDNGKDGLPGAQGPPGPPGQDGARGEAGPTGP
RGFQGLPGAPGSPGSPGKDGAHGPPGPQGPTGPAGLRGERGYPGERGPIGQPGTPGERGE
PGNPGHDGPPGLPGKQGEKGHMGAPGMMGIPGHKGLPGPAGVKGERGSTGPMGPEGAPGR
PGDRGPQGNVGPPGAPGEPGERGSPGNPGTPGEQGANGAPGERGPIGPAGPPGFPGAPGI
VGLPGAKGDRGLMGIKGSQGDVGPQGQPGEQGLPGPVGLTGPKGARGEPGLRGEPGMSGL
PGRPGDAGAPGQPGSPGQPGIAGPQGLKGSSGEPGRPGQPGQPGLQGPPGPEGQKGETGN
DGPPGPPGTQGPQGPVGDRGMPGLPGPPGSQGLRGMRGPAGETGQPGKPGKDGPPGPQGL
IGPQGNPGPQGEQGPVGPAGKPGAPGIQGRPGDKGPPGQQGNQGAPGNPGLPGPPGPTGP
AGQHGERGPKGETGLPGVVGPMGLRGKPGPPGIEGPKGETGEPGPKGIKGHRGLIGLQGL
PGSPGLKGDTGLPGLQGAPGKPGEMGMRGPQGRDGNPGPPGQPGPAGPRGYSGHDGKPGP
VGPAGPPGPPGPPGETLGYDVAALTALLNQGQTKGVDVMGDQPMIDKLTEGLSDEEKQAL
VMKAFDHVKASFERFKRPNGQQTAPAKTCRDLFAAYPDFKSGDYWIDPNEGDIQDAILVY
CEKERRATCIIPQPKESNVLSYVGSEKEVWLGEMAGGMDINYKTDSNQMGFLQLLSGRAS
QKITFHCRNTVAYLHDDSTAARDGLKLLSWNDAELTPKGPQRLRYEAELDECRKRSNAWA
KTVITYTTQKTQRLPIVDIAIRDVGETNQQFRVQLGSACFY
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaaactattttggctgttaatcaccgcctgtgttctaatagctgcagtcact
gccgccgccgaagagacaaaagatgcccccaaaaatgctgccaagaacgtaaaaaaggcc
cgccttaggaagaagatcgttgaacgcccccaggccgaggagcccaagccggacgatgcc
agtctggacgatttggataattatgactacagcaattacgatgatgatttgggttccgat
gttgacacattcgaggcacatggtgtggaggttgcctcctccaccgccaccccccgcatg
gcttccaatgtcatcaatgccttctcctgtttctttgagggcaactggtatcgggacaac
gatgagtttaccaccgaacaaaacaactgtgttcacaattgcatttgccgggaggggaag
gtcgactgtaccccctctgcagattgcaaacttggacttggccctgccatagatttgcaa
ccactcgacgaaattcccacaacaactccaaaacctgttacgccagcaacgacgccggcc
tataacccctatgaagcagctttgggacctcgtggagagccgggctatcctggtgcccaa
ggtccctcaggagaggccggattccctggggcacctggcacccccggtgtacctggaaat
ccaggtccccctggtcccatgcccgacatgagctactatcatcaacaattggccgctgaa
tatgcaaactccgacaaaggccctacggcagctgctttctacgcccctgtaccaataccc
acaaatggtcagccaggacctcggggtccacccggcactgtgggacctcagggtcctcaa
ggtttccaaggcacacgtggtgagcccggagaacctggtgttcagggaccacctggtcca
atgggtcccagaggtttacctggtccccccggaaaagatggcatgcctggtgaggatgga
gaacctggaccccagggtttggctggtacacctggccctcgtggccttcccggtctacca
ggtcaacccggattgaaaggacatcgcggtctacccggtttggatggatcaaagggtgat
atgggtgcccccggtgaaaaggggtctgctggtgtaatgggccctgtgggtccacctggt
tcaactggtcccgccggtccccgcggtgaacgtggtcgtgaaggtccacccggccagcct
ggtgctcgtggcttggatggcaaccctggcactcccggccaacctggagccataggtaaa
cctggacctccaggtttccccggtattcccggcgccaaaggtgatatgggtcacatgggc
cccaaaggtgatcaaggtttgcaaggtccacgcggtgaggcaggtcgtccaggtgccaca
ggtgaaaatggtctcccgggccttcccggtaaggatggtatgcctggcgacaagggttct
atgggtgctcctggtattgctggtcctcaaggtttccccggtcccagaggacccgatggc
atgccaggcagtcccggtgagcccggtgtaaaaggtgctgccggacaacccggcgaaaga
gggtataaaggtgaccaaggcattaaaggtgaagcaggccaaccaggccccagaggtcta
cccggcactgttggacccgaaggcaagcgcggcaaacgtggcatgcgtggtcccaccggc
ccagctggtcccacaggtgaacgtggttctcccggcatgcctggtcttcctggacccgat
ggccccatgggtcccaagggcacacccggtgagagaggtgtacaaggtcctcctggcgaa
aaaggcagcaatggtgatattggtcctcccggtctacctggtctccagggtttgagaggt
cttcccggtcgtgtgggtcccgatggcagagatggtccaccaggtgaacgtggtcctcca
ggtgcagatggaaagcccggtgaacaaggtttgcaaggtcttcaaggtttgcccggtccc
atgggtatacccggtgataagggtattcctggagaacctggtaaggcaggcgagcccggc
gttgctggcccccctggtccgcgtggtgataatggcaaagatggtttacccggagcccag
ggtccacctggcccaccgggtcaagatggtgctcgaggtgaagcaggtcccacaggtccc
agaggtttccaaggtttgccaggagctcctggtagccctggatcccctggcaaggatggt
gctcatggcccaccaggtccccaaggtccaactggtccggctggtttgagaggcgaaaga
ggttatcccggagaacgaggccctattggtcaacctggtacacctggcgaaaggggtgag
cctggaaatccaggacatgatggaccaccgggtctccccggcaaacaaggcgaaaagggc
cacatgggtgcccccggtatgatgggcatacccggccacaaaggtctacccggtccagct
ggtgtaaagggcgaacgtggtagcacaggccccatgggacccgagggtgcccccggccgt
cccggtgatagaggtccccagggtaatgttgggccaccaggagcccctggtgagcctggt
gaacgtggtagtcctggcaatcctggtacccctggtgaacaaggtgcaaatggtgccccc
ggtgaaagaggtccaattggtccagctggtcctcccggttttccaggtgcccctggtatt
gttggtttacctggagctaaaggtgatcgcggtttaatgggtattaagggttctcaaggt
gatgtcggtcctcagggacaaccgggcgaacaaggtctgcccggtccagtgggtttgacc
ggtcccaagggtgctagaggtgaacctggtctaagaggagagccgggtatgagtggcttg
cccggaagacccggagatgctggagcaccaggacaacctggcagccccggccagcctggt
attgctggaccccaaggcctcaagggtagctcgggtgagcccggacgccctggccaacct
ggacaacctggcttgcaaggaccccctggccccgagggtcaaaaaggcgaaactggcaat
gatggtccacccggacctcccggcactcaaggtccccaaggtcctgtgggagatcgcggt
atgcctggcttacctggccctccaggatcccaaggtttacgtggcatgcgtggtccagct
ggagaaactggccaaccaggcaaacctggaaaggatggccctcccggtccccaaggtttg
ataggtccacaaggcaatcccggtccccaaggcgaacaaggtcccgtgggacctgcaggt
aaaccaggtgccccaggtattcaaggacgtcctggtgataagggacctcccggtcaacaa
ggcaatcaaggcgctcccggtaatccaggtcttcctggcccacccggtccgactggtcca
gcaggtcaacatggtgaacgtggtcccaagggtgaaacaggtctacccggcgtggttggt
cccatgggtcttagaggcaaacctggtcctccgggtattgagggccccaagggagaaact
ggcgaaccaggtcctaagggtattaagggtcacagaggtttgattggtttgcaaggttta
cccggttcccctggtttgaagggtgacacgggtctgccgggtctacaaggagctccaggc
aaacccggagaaatgggaatgagaggtccccagggcagagatggcaatcccggacctcca
ggtcaaccaggtcctgccggccccagaggttacagcggtcacgatggtaaaccaggtcct
gtgggcccagccggtcctccaggtccacctggtccaccaggtgaaactttgggttatgat
gttgctgccctgacagccctgctcaaccagggtcaaaccaagggtgtggatgttatgggt
gatcagccaatgattgataagctaacggagggcctgtccgatgaggagaaacaggccttg
gtcatgaaggcctttgatcatgtcaaggcctcctttgaacgtttcaagcgtcccaatggc
caacagactgccccagccaaaacttgtcgtgacctgtttgctgcctatcctgactttaaa
tccggagattattggattgatcccaatgagggagatattcaggatgccattttggtctat
tgtgaaaaggagaggagagccacgtgcattattccgcaacccaaggagtcgaatgtgttg
agctatgtgggctccgaaaaggaagtttggttgggtgaaatggccggaggtatggacatt
aactataagaccgattccaatcaaatgggtttcttgcaactgctttccggaagggctagc
cagaagataacgttccattgtaggaacacggtggcctatttgcatgatgattcgacggca
gcaagggatggcttgaagttactgtcctggaatgatgctgaactgacacccaagggtccc
cagagattgcgctatgaagccgagctggatgagtgcaggaaacgttccaatgcctgggcc
aagaccgtgatcacctacaccacccaaaagacccagcgtctgccaattgtcgacattgcc
atacgcgatgtgggtgagaccaatcagcagttccgtgtgcagctaggatcagcttgtttc
tattag
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integrated database retrieval system
