Musca domestica (house fly): 101891055
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Entry
101891055 CDS
T03448
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mde
Musca domestica (house fly)
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mde03016
]
101891055
Enzymes [BR:
mde01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
101891055
Transfer RNA biogenesis [BR:
mde03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101891055
Prokaryotic type
tRNA splicing ligases
101891055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
101891055
NCBI-ProteinID:
XP_005183212
UniProt:
A0A1I8MKX8
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRTYDEELKYLEKIGDCCWRIKKGFQPNMNVEGCFYVNERLEKLMFEELENACQPGAV
GGFLPGVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNLAAFDMDDPNSVVSPGGVGFD
INCGVRLLRTNLFEKDVQPVKEQLAQSLFDHIPVGVGSKGILPMNAADLEDALKTGMDWS
LRKGYAWTEDKEHCEEQGCMSGADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQIVDEIYD
KFAASKMGIKEKGQVCIMIHSGSRGFGHQVATDALVEMEKAMKRDNIETNDRQLACARIN
SPEGQDYLKAMAAAANFAWVNRSSMTYLTRQAFAKQFETTPEDLDMHVIYDVSHNIAKIE
NHIVDGKEKKLLVHRKGSTRAFPPNHPLIPADYQSTGQPVLVGGTMGTCSYVLTGTEKGM
QETFGSTCHGAGRALSRAKSRLNLDYKEVLEKLENLGIAIRVASPKLVMEEAPEAYKDVN
DVVDTCHAAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttgttcgaacctacgatgaagagttaaaatatcttgaaaagatcggcgattgctgt
tggcgaatcaagaaaggtttccaacccaacatgaacgtcgaaggatgtttctatgtaaac
gaaaggttggaaaagttgatgttcgaggaattggagaacgcctgtcagcctggagctgtg
ggtggtttcctgcctggtgttaaacaaattgcaaatgttgctgccctgcctggtattgtt
ggacgttcaattggtttgcctgatatccactctggctatggttttgctattggaaatctg
gcagcctttgatatggatgatcccaattcagtggttagtcctggcggtgtgggtttcgac
attaattgtggtgtacgtttgctgagaaccaatctttttgaaaaagatgtacaacccgta
aaggaacaactggcccaaagtctgtttgatcacattcccgtgggagttgggtccaagggt
attttacccatgaatgctgctgatttggaagatgctttaaaaacgggtatggattggagt
ttgcgtaaaggctatgcctggactgaagataaagaacattgtgaagaacagggttgcatg
tcgggtgcagatccctctaaagtcagtttgagagccaaaaaacgaggtttgccacagctg
ggaacattgggggctggcaatcactatgcggaaattcaaattgtggatgaaatttatgat
aagtttgccgcttctaaaatgggtattaaggaaaagggtcaggtatgcatcatgatccac
tccggctccagaggttttggccatcaagtggccactgatgcattggtcgaaatggaaaag
gccatgaaacgggataacattgaaactaacgatcgccagctggcctgcgctcgtatcaat
tctcccgagggccaagattatctcaaggccatggcagctgctgccaattttgcctgggta
aatcgtagttccatgacataccttacccgccaagcatttgccaaacaatttgaaacgacc
cccgaagatttggatatgcatgttatctacgatgtatcgcacaacattgccaaaattgaa
aatcacattgttgatggcaaagaaaagaagttgttggtacatcgcaaaggctccactcgc
gccttcccacccaatcaccccctcatccctgcagattatcaatcaactggacagcctgtt
ttagtgggcggcactatgggaacatgttcttatgtcttgactggtaccgaaaagggtatg
caagagacattcggttccacctgtcacggtgccggtagagctttgtcccgagccaaatca
agactcaatttggactataaagaggttttggagaaactagaaaatttgggtattgctatt
cgtgtggcttctcccaagcttgttatggaggaggctcccgaagcatacaaagatgttaac
gatgttgttgatacatgccatgctgccggtattagtaagaaatgtattaaacttagaccc
attgctgtgatcaaaggttga
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