Musca domestica (house fly): 101891228
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Entry
101891228 CDS
T03448
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mde
Musca domestica (house fly)
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mde03016
]
101891228
Enzymes [BR:
mde01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
101891228
Transfer RNA biogenesis [BR:
mde03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101891228
Prokaryotic type
tRNA splicing ligases
101891228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
101891228
NCBI-ProteinID:
XP_005183213
UniProt:
A0A1I8MLA1
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRPYVEELKYLEKISDCCWRIKKGFQPNMNVEGCFYVNAKLERLMLEELKNACRPGAV
GGFLPGVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNMAAFDMDDPNSIVSPGGVGFD
INCGVRLLRTNLFEKDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSMRAKKRGLPQLGTLGAGNHYAEIQIVDEIYD
KWSASKMGIEEKGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDRQLACARIN
SPEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFQTTPDDLDMHVIYDVSHNIAKIE
NHIVDGKEKKLLVHRKGSTRAFPPHHPLIPVDFQLTGQPVLVGGTMGTCSYVLTGTEKGM
QETFGSTCHGAGRALSRAKSRRNLDYKDVLEKLEDLGIAIRVASPKLVMEEAPESYKDVT
DVVDTCHAAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtagttcgaccttacgtagaagagctgaaatatctggagaagatcagcgactgctgt
tggcgtatcaagaagggcttccaacccaacatgaatgtggaaggatgtttctatgtcaat
gcaaagttggaaaggctgatgttggaagaattgaagaatgcctgtcggccaggggccgtg
ggtggtttcctgccaggtgttaaacaaattgcaaatgttgctgccctgcccggcattgtg
gggcgttcaattggtttgcctgacatccactctggctatggttttgccatcggtaatatg
gctgcctttgatatggatgatcccaattcaattgttagccctggcggtgtgggttttgac
atcaattgtggtgtacgtttgctgagaaccaacctttttgaaaaagatgtccaacccgtc
aaggaacaattggcccaaagtctgtttgatcatattcccgtgggtgtgggctctaaaggt
attattcccatgaatgcccatgatttggaagaagctttggagatgggtatggactggagt
ttacgtgaaggctatgtctgggctgaggataaggaacattgtgaagaatatggtcgcatg
ttgaatgcagatccctccaaagtaagcatgagagccaagaaacgaggtttgccacagctg
ggaactttgggggctggtaatcattatgctgaaatacaaattgtcgatgaaatctatgac
aagtggagtgcctccaaaatgggcatcgaggaaaagggtcaggtatgtgttatgattcac
tccggctccagaggctttggccatcaagtggccactgatgcattggtacaaatggaaaag
gccatgaaacgagataacattgaaaccaacgatcgccagctggcctgtgctcgtatcaac
tctcccgagggtcaagattatctcaaagccatggcagctgctgccaattttgcctgggtc
aaccgaagttctatgacatttttgacgcgccaagcatttgccaaacaattccaaaccaca
cccgacgacttggacatgcacgttatctatgatgtgtcgcacaatattgccaaaattgaa
aatcacattgttgatggcaaagagaagaagttgttggtgcatcgcaaaggttctactcgc
gccttccctccccatcatcctcttattcctgtagattttcaactgaccggtcagccagtt
ttggtaggtggtaccatgggtacgtgctcatatgttttgactggtaccgaaaagggtatg
caagagacattcggttctacatgccatggggccggtcgtgctttgtctcgagccaaatca
aggcgaaatcttgactataaagatgttttggaaaaactagaggatttgggtattgccata
cgtgtagcttcacccaagttggttatggaagaagctccagagtcgtacaaagatgtaacg
gatgttgtcgatacatgtcatgctgctggtattagtaaaaaatgcattaaactaaggccc
attgctgttatcaagggttga
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