Musca domestica (house fly): 101891606
Help
Entry
101891606 CDS
T03448
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mde
Musca domestica (house fly)
Pathway
mde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101891606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mde03041
]
101891606
Enzymes [BR:
mde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101891606
Spliceosome [BR:
mde03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101891606
Complex B
101891606
Complex C
U2 SnRNP specific factors
101891606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF1699
Motif
Other DBs
NCBI-GeneID:
101891606
NCBI-ProteinID:
XP_005189100
UniProt:
A0A1I8NCD0
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MSGYRGIGGGGYPYKPSSSSNRSAMNAVPPPSSLNNRGYQKFSSSSANKAGTSKHGYSTL
ESISQFTNSQNYIGKRRGCNTEDDYFDDDDEQTTPSRPYIPAPGSPGSQQSNKQDSDSEE
DPLDQFMAGLEKQVEREKVCKEGNQSGVPAVAKGVRGDIDEEDNEESYYRYMEENPQAGL
RDDNSDVEIEYDEDGNPIAPPKKKDIDPLPPIYHSQIDYEPFEKNFYTPHEDISNLNEEQ
VRDLRKTLGVKVTGPEPPNPVTSFAHFGFEETLMKAIRKAEYTQPTPIQAQSIPAALGGR
DIIGIAKTGSGKTAAFIWPMLVHIMDQRELKTGDGPIGLILAPTRELSLQIYNETKKFGK
VYNVNVVCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKMKATNLRRVTFLVLDEADR
MFHMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDVLTDPVRIVQGDLNEANQDI
TQYVFVFPNPLQKWNWLLLNLVRFLSEGSVLIFVTKKVDAETVASNLLTKEYNCLLLHGD
MDQAERNKVITQFKRKDCDILVATDVAARGLDIPHIKNVINYDIARDIDTHTHRIGRTGR
AGEKGTAYTLVTEKDKEFAGHLVRNLEGADQEVPQDLMDLAMKSSWFRSSRFKQGKGKKP
AGNYAGLGYRERAAPTYSETRGSYANTSKSLSSAGPATDRYAAMREAFRAQYMSQFKPST
DRTWEETLPETGVFAAPAPPPPPSTSISAKHSNIDTSENKRKAKKSRWN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggtaccgtggaattggaggtggcggatatccttacaagccgtcctcatcgtca
aatcgctctgccatgaatgcggttccaccaccttcttcgctaaataatcggggttaccag
aagttttcgtcgagttcagctaacaaggctggtacttccaaacatggctactctaccctg
gagtctatcagtcagtttacaaactcccaaaactatattggaaagcgaagagggtgtaat
actgaagatgactacttcgacgatgacgacgaacagactacaccttcacggccgtatata
ccggctccgggttcgccaggttcacagcaatctaacaagcaagatagtgattctgaagaa
gatccgttggaccaatttatggctggactggaaaagcaggtcgaaagagaaaaagtttgc
aaggaaggaaaccagtcaggcgttcccgctgtagcaaagggggtacgtggcgacattgac
gaagaggacaatgaagaaagttattaccgatacatggaagaaaatcctcaggctggacta
agagatgataattcagatgtggagatcgagtacgacgaggatggcaatcctattgctcca
ccaaaaaagaaagatatcgaccctttacctccgatatatcattctcagatagattacgag
ccgttcgaaaaaaatttttacacaccgcatgaagacatttcaaatctaaatgaggagcaa
gtacgagatctacgaaaaacacttggagttaaagttacaggtcccgaaccgccaaatccg
gtaacttcatttgctcatttcggatttgaagaaactcttatgaaggccatacgaaaggca
gagtacacccagccaacccctatacaagcacaatctatcccagcagccttgggaggccga
gatattattggaatagccaaaactgggtctggcaaaacagctgcttttatatggcctatg
ctcgttcacataatggatcaacgtgagctaaagactggtgacggacccattggtttgata
ttagcacctaccagagaattgtccttacaaatatacaacgaaactaaaaagtttggtaag
gtttacaatgttaatgtagtctgttgttatggaggcggatccaagtgggaacaaagcaaa
gctttggaacaaggcgcggaaattgtggtagctacaccaggtcgtatgatcgatatggtc
aagatgaaagccactaacttacgcagagttacctttttggttcttgacgaagccgatcga
atgtttcacatggggttcgaaccacaggttagatctatatgtaatcatgttcgtccagat
cgccaaacgttacttttctccgccactttcaaaaagcgcatagagcgcctggcgcgagac
gttcttacagaccccgtccgtattgtgcaaggtgaccttaatgaggccaatcaagatatt
acccaatatgtatttgtttttcccaatccactgcaaaagtggaattggctccttttgaat
ttagtgcgattcttgtcggagggcagcgttttaatatttgtgacaaagaaagtcgacgcc
gaaacggttgcaagtaacttgctaactaaggaatacaactgtcttttgctacacggcgat
atggaccaggcggagcgtaacaaggtaataacacaatttaaacggaaggattgtgatatt
ttggttgctacggatgtggcagcacgaggcttagacatacctcatattaagaacgtcatt
aattacgacattgcccgggacatcgatacccacacgcatcgcattgggcgaacaggcaga
gctggagaaaagggaacagcatacacgctagtcactgagaaagacaaagaattcgccggg
catttggtgcggaatttagaaggtgcagaccaagaggtaccccaagatttaatggacctt
gcaatgaagagttcttggtttcgaagttctagatttaagcaaggaaagggaaaaaaacct
gcgggcaactatgcaggcttggggtatcgagagcgcgcagcgccaacatatagcgaaacg
agaggtagctatgcgaacacaagcaaatcactatcttctgctggcccagcaacagaccgg
tacgctgccatgcgagaagctttccgtgctcaatatatgtcacagtttaaaccgtctacc
gaccgtacatgggaggagacattacctgaaacaggtgtttttgcagctcctgctccacca
ccgccaccatccacgtcgatttcagcaaaacactccaacattgatacatctgaaaataag
cgtaaggcaaagaaaagtaggtggaactag
DBGET
integrated database retrieval system
