Musca domestica (house fly): 101891942
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Entry
101891942 CDS
T03448
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mde
Musca domestica (house fly)
Pathway
mde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101891942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101891942
Enzymes [BR:
mde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101891942
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101891942
mRNA degradation factors
3'-5' decay
Ski complex
101891942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
DEXQc_Suv3
Helicase_C
ResIII
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
101891942
NCBI-ProteinID:
XP_005186966
UniProt:
A0A1I8N3B6
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MTTVLENNNKLKNYILAPELSIHDPLPDIIPREYNEEKLLHLPRGPASTKLVPKRDFITG
KILLFVEVEIEDVGANAKNSTSMRREPGKLDEITRGSATNYPFWPGGFDEPPKEIKRLEI
EGFEIEGELLTTPPGFKAGYDFTKHEQFKNSILKPFAAKEAEKVNLLRNLEDDLDVQEWL
KITQEEDNSQEEKRSTMLPPEFKDVDDDIMATELKPVLEISTAKDKTLQTEWAEMLDISH
PITDFKEKIPCPAMSFPFELDTFQKQAIIKLEERQYVFVAAHTSAGKTVVAEYAIALSQR
DLTRTIYTSPIKALSNQKYRDFKKTFKDVGLITGDLQIDPTATCLIMTTEILRSMLYCGS
DITRDLEYVIFDEVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTK
KRKVFVISTLKRPVPLMHYLYTGSGGKTKDDRFLLVDDQGRFLQENYEKAVEKKKAAQSK
SKQMSGGTGPKHQTTTPKQDQNTWIGLIDFLKRNDLMPVVAFTLSRNRCDMNAQALNSID
LNTAREKGSVEIFFHQCLSKLKPPDRELPQVLQMKDSLSRGIGVHHSGILPILKEIVEML
FQSGLVKLLFATETFAMGVNMPARTVVFDSHRKFDGMEVRNLKPGEYIQMAGRAGRRGHD
KNGCVILMCKANVPPAQDLRSMILGKPEKLESQFILRYAVILTCLRIESIKVEDIMKFTF
KEFNQKLQLPAQQKQLEVAQSKFSQMPELGEHLQPLCKFYDLATEYIGEKQRLMRFLLAQ
PKIVKELKVGRVVLVCKGKHYNKLGVLLSMKAVQGKETTYRVLVLDHQFKSNEKDDFYRG
ESYYKMIALTPQFKYYHPEGIGGHTILDLHAADFVEITKTNVKIDADVIIRNWEQRQIER
FKDSPPGASVVKLVSELHQLNENYIQNSDSIKFINMSKEINVNAETEMAQIRYLEHLAKQ
LQDVLPHTNIAGFEQEFAIVYERKMLEHRIEELKFKNSTKNLSLYPDYCNKLEVLRALKY
IDELDEVTLKGKVACEMGQNELLITELILCNMFNNLEPAEIAALLSGLVFQAKIQGEPVI
PEKLKKCVKEFEEINDNILSVELRHHAVVQTEDRLNFGLLEVVYEWARNKPFAEIMKLTE
VQEGIIVRCIQQLDETIRDVKTAAIRIGNPALQSKMEEASNAIKRDIVFTASLYTTF
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtcctggaaaataataacaaattgaaaaattatatattggcaccggaattg
tccatccatgatccactacctgatataataccgcgtgaatataatgaagagaaactgctt
catttaccacggggcccagcaagtacgaaactagtgccgaaaagagatttcattaccggc
aagattttgttatttgtggaagtcgaaatagaagatgtgggagctaatgcaaaaaattcg
acatcaatgaggcgtgaaccaggaaaattagatgaaattaccaggggatcggcaacaaac
tacccattttggccaggtggatttgatgaaccaccaaaagaaatcaaaaggctagaaata
gaaggctttgaaattgagggtgaactgctgaccactccaccgggctttaaagccggctat
gactttacaaaacacgaacaattcaagaacagcatcttaaagcctttcgctgcaaaggaa
gcggaaaaggttaacttgttgcggaatcttgaagatgacttggatgtccaggaatggttg
aagataacccaagaagaagacaattcccaggaggaaaaaaggtcgacaatgctaccgcct
gaatttaaagatgtggacgatgacataatggcaacagagttaaagccggttttggaaata
tccacagctaaggacaaaactctacagaccgaatgggcagaaatgttagatatttcacat
ccaatcacagattttaaggaaaaaataccctgtccggctatgtcatttccatttgaactg
gatacttttcaaaagcaagccattatcaaattggaagaacgccaatatgtttttgtggct
gcccatacgtcggctggcaagactgtggtagcagaatatgccattgcattgtctcaacga
gatttgacaagaaccatttatacttcgcctattaaggctttatcgaaccagaaatatcgt
gactttaagaagacattcaaagatgttggtctcataactggtgaccttcaaatcgaccca
actgccacttgtttaattatgaccacagagattttgaggtcaatgctctattgtggcagc
gatataactcgtgatttggaatatgtcatattcgatgaagtgcattacattaacaatccg
gaaagaggccatgtctgggaagaagttattatactattaccagatcatgtcaacattatt
atgttatctgccacggtgccaaacaccatggaattagccgattgggtgggtagtacgaaa
aaacgtaaagtctttgttattagtactctgaagagaccagtgccgttgatgcattatctt
tacacgggatcgggaggtaaaactaaagatgacagatttttattggtcgatgaccaggga
cgctttttgcaagaaaactatgagaaggcagtggaaaagaaaaaggctgcacaaagtaaa
tcgaagcagatgtccggtggtacaggtcccaaacatcaaacaacaacacccaagcaggat
caaaatacatggataggattgatagactttttaaaacgcaacgatcttatgccggttgtg
gcattcacgctgtcacgaaatcgatgtgatatgaatgcccaggccctaaattccattgat
ttgaacacagctcgtgaaaagggctctgttgaaatattcttccatcagtgcttgtctaag
ttgaagccaccagatcgtgaattgccacaagttttacaaatgaaagactctctgagtcgt
ggtataggcgtgcatcacagtggcattttgcctatactaaaggaaattgttgaaatgtta
ttccaatcaggtcttgtcaagttgctctttgccaccgagactttcgccatgggtgttaat
atgccagccaggacggtggtctttgattcgcatcgaaagttcgatggcatggaagtcaga
aacctaaaacccggcgaatatattcaaatggctggaagggctggccgaagaggccatgat
aaaaatggctgtgtgattttaatgtgtaaggctaatgtaccaccagctcaagatttgcgt
tccatgattttgggtaaaccagaaaaactggaatcacaatttattttacgctacgctgta
atcctaacttgcctgcgtatagaaagcattaaagtcgaggacattatgaaatttacattc
aaagaattcaatcagaaactacagctgccggctcagcaaaaacaattggaagttgcacaa
agcaagttttcgcaaatgccagaattgggtgaacatctgcaacctttgtgtaaattttat
gatttggccacagaatatataggcgaaaaacagcgtttaatgagatttttactggctcag
cctaagattgtcaaagaactaaaagtcggacgtgtggttttggtgtgcaagggcaaacat
tataataagcttggtgtgcttctatcgatgaaagcggtacagggcaaagaaaccacatat
agagttttagtacttgatcatcaattcaaaagcaatgaaaaggatgatttctatagagga
gaaagttattataaaatgattgccttaacgccacaatttaagtactaccatccagaaggt
attggtggacatacaatactggatcttcatgcagcagattttgtagaaatcaccaaaacg
aatgtaaagattgatgctgacgttataatacgtaattgggaacaacgacagattgaacga
tttaaggattcaccaccaggagcttcagtcgttaagctggtctcggaactacatcaattg
aatgagaactatatacaaaatagcgattcaatcaagttcataaacatgtccaaagagatt
aatgttaatgctgaaacggaaatggcccaaattcgttatttggaacatttagccaaacaa
ctgcaagatgtgttgccacacacaaatatcgctggctttgaacaagaatttgccattgta
tacgaacgtaaaatgttggaacaccgcattgaagaattgaaatttaaaaactctactaaa
aatctatccctctacccggactactgtaataaattggaagtgcttagagcattgaaatat
attgatgaactagatgaagtgacgttgaagggaaaggtggcatgtgaaatgggtcagaat
gaattgttaattaccgagttgatactttgtaatatgtttaacaatttagaacctgcagaa
attgcagctctactctcaggcttggtctttcaagccaaaatccaaggggaacctgttata
ccggaaaaacttaagaagtgtgtcaaagaatttgaagaaattaatgataacatattatct
gtcgagctacgccatcatgccgttgtacagactgaagaccgtttaaactttggcttattg
gaagtcgtttatgaatgggctcgcaataagccatttgccgaaattatgaaattaaccgaa
gtccaggaaggtattattgttcggtgcattcagcaattagatgaaacaattcgtgatgtt
aaaactgctgccatacgtattggcaatccagcattgcaaagcaaaatggaagaagcatcg
aatgccattaaacgtgatattgtatttacagctagtttatatacaacgttttaa
DBGET
integrated database retrieval system
