Musca domestica (house fly): 101892287
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Entry
101892287 CDS
T03448
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mde
Musca domestica (house fly)
Pathway
mde03015
mRNA surveillance pathway
mde03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101892287
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101892287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101892287
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
101892287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
101892287
NCBI-ProteinID:
XP_005187550
UniProt:
A0A1I8NCV3
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MADGVVLDLYAEDLDTQNQDEFAGDGVDLYDDIGGAPEASSSGAAIAPATGGGESPSAGN
NGAEGGAANAGTNGVYHQGAGSLAPNQAGRRFQLYVGNLTWWTTDQDIANAIRDIGVTDF
QEVKFFENRANGQSKGFSVVSLASENSMRLVLERLPKKELHGQAPVVTYPTKQALNQFES
LQKTRPVPPPQQNGPPRGPAPPNMMPGGPMPPHPGGPQGVPPGHQPRMPMNPNMPPGQFR
PQHMPPQGPPVGQGPPRMQPPMHQGPPMGPQQGMQGPPRFGQQQSQWPGQPRPNGPRPGP
MNGPPQRPPQMFQGPPGGMPMRGPRPDWRPPMHGGFPQGPPGGPPQGPPHMQGPPRGPPG
GPPQMGGPGVPPPGGPHGAPGGPAPHVNPAFFNQPGGGPPQHPGGPPMSGGPPHGPPGPQ
QGMNMPPQHGPPPHFAQQGAPRGPWPGPPGPVKQQTFPDPQQPMGPQLSEAEFEEIMGRN
RTVSSSAIARAVSDAAAGEYSSAIETLVTAISLIKQSKVAHDERCKILISSLQDTLHGIE
TKSYNRRERSRSRERSHRQRPRRERSSSRYRERSRERERDRERERDRDAGGSRKLDVVAN
NYRDRSRSRERERPSANDHYRDDSSSRSARARKTPEPTGGDVGTEAPSKRSYYEERYRSS
DRDRERERDRDRERDRDRDRERERDREHRSRH
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcgtggtattggatctctatgcagaagatttagatacacaaaatcaggat
gaatttgctggcgatggggttgatttgtatgatgatataggaggggcgccagaagcatcc
agtagtggtgctgcaatagcaccagcaacgggtggtggagaaagtcccagcgcaggcaat
aatggcgcagagggtggtgctgcaaatgccggaacaaatggagtctaccatcaaggtgct
ggtagtttggctcccaatcaagctggtaggcgttttcaattgtatgtgggaaatttgact
tggtggacaaccgatcaagatattgccaatgctatacgcgatattggagtcactgatttt
caagaagtaaagtttttcgagaatcgggccaatggccagtccaaaggattcagtgttgta
tcattggcttcggaaaatagtatgcgcttggttttggagcgtttgccgaaaaaagagttg
catggccaggcgccagttgtcacatatccaacaaagcaggccttaaatcaatttgagagt
ctacagaaaactcgtccagtaccgccgccacaacaaaatggaccaccaagaggcccggcg
ccaccaaatatgatgccaggaggcccaatgccaccacacccgggtggaccacaaggcgta
ccgccaggacatcagccacgtatgcctatgaatccaaatatgccaccaggtcaatttagg
ccacagcatatgccaccccaaggaccgccagtaggccagggacctccaagaatgcagcca
ccaatgcatcagggtccgccgatgggaccgcaacaagggatgcaaggaccaccgcgattt
ggccaacaacagtcacaatggccggggcagccgcgtccgaatggtccacgaccaggacct
atgaatgggccaccgcaacgtccgccacaaatgtttcagggacctcccggcggcatgcca
atgcgcggccccagaccagactggaggcctccaatgcatggaggctttccgcagggaccg
ccaggtggtccaccacagggaccaccacatatgcaaggtccaccaaggggtcctccgggt
ggccctcctcaaatgggtggtcctggtgttcctccaccaggcggacctcatggagcacct
ggtggtccagctccacatgtaaatcccgcattctttaatcagccaggcggtggacctcca
caacacccagggggtccgccgatgagtggtggtccaccacatggtccacccggaccccaa
cagggaatgaatatgccaccccaacacggtccacctccccatttcgctcagcagggagca
cctcgggggccttggcccggtccgccaggaccagttaagcaacaaacgttcccagatccc
caacagcccatgggacctcaattaagtgaagcagaatttgaagaaataatgggccgcaat
cgcaccgtcagcagttcggccattgcgcgtgcagtatctgatgccgcagccggtgaatat
tccagcgcaattgaaactttagtcacagcaatctcattgatcaaacaatcgaaggtggct
cacgatgaacgttgtaaaatattgatcagctcgttacaagatacattacacggcattgaa
acaaaaagctacaacagacgcgaacggtcaagatcacgcgaaagatcacatcggcaaaga
ccgcgacgcgaaagatcttcatcacgatatcgtgaaagatcacgcgaaagagaacgtgat
cgcgaaagggaacgagatcgtgatgctggaggatcccgtaaacttgatgtcgtagctaat
aattatcgtgatcgctcaagaagccgtgaacgagaacgacccagtgccaacgaccactat
cgtgatgatagctccagccgctcggcaagagctcgaaaaacaccagagcctacgggcgga
gacgtaggcaccgaagcgccatcgaaacgtagttactacgaagaacgttatcgatcatcc
gatcgtgatcgggaacgtgagcgggaccgtgatcgcgaacgtgatcgcgaccgtgatcgt
gagcgtgaacgcgacagagaacatcgttccagacattag
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