Musca domestica (house fly): 101892950
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Entry
101892950 CDS
T03448
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 1
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
mde
Musca domestica (house fly)
Pathway
mde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101892950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mde03021
]
101892950
03019 Messenger RNA biogenesis [BR:
mde03019
]
101892950
Transcription machinery [BR:
mde03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101892950
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101892950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
101892950
NCBI-ProteinID:
XP_005178849
UniProt:
A0A1I8MV98
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MFSVCKQSHPATGVEFAITCRFFNNVDENVVVAGANILKVYRIIPNLDVSQRHAKINPNE
LRNPPKMRLECLASYTLYGNVMSLQSVTLTGSMRDALLISFKDAKLSVVQHDPDTYALKT
LSLHYFEEEDIKDGWTGRYYIPMVRVDPDARCAVMLVYGKRLVVLPFRKENGIDEIELAD
VKPIKKAPTAIMSRTPILASYLIALRDLDEKIDNVLDLQFLHGYYEPTLLILYEPVRTFT
GRVAVRSDTCVLVAISLNIQQRVHPIIWTVTGLPFDCLQVFPIQKPIGGCLVTTVNAIIY
LNQSVPPYGVSLNSSADHSTSFPLKPQDGVRISLDAANIAFIDVDKLVVSLRTGDLYVVT
LCVDSMRTVRNFHFHKAAASVLTSCMCVCQSEYLFLGSRLGNSLLLHFTEEDQSTVITLD
EYDGTDGSGGGGGGGGAGDENRKARRIEDEELEVYGSGAKTSVQLRKYIFEVCDSLLNVG
PINFMCAGERVEFEEGGTTLKPQASQLADLKIDIVASVGHSKNGALCVFANCINPQVITS
FELDGCLDVWTVFDDVSRKMSHHDHHDFMILSQKTSTLVLQTGEEINEIENTGFSYNQPT
IFVGNLGQNRFIVQVTTRSVRLLQGKRLIQNVPIDEGAPVVQVSIADPYVCLRVLHGKVI
TLALRETKGTPRLAINKNTISSVPAVISLSAYKDLSGLFTTKSDDVLNLTGGSGNSLYAG
LGYMKAEPNMKIEDEEDLLYGESGNAFKMNSMADLAKQSRQKNSDWWRRLLLPVKSTYWL
VVGRESGTLEIYSMPDMKLVYLVNDIGNGDIILTDSMEFVPANLNQPDNKQGILLNCMPQ
HTNSPLPLEVALVGLGYQGNRPLLMIRTRLELLIYQAYRYAKGHMKVRFKKLNSLNMRDD
SGGDQTMEIDDDSSELESYNLQERYINRLRYFSNISGLNGVVVCGPNPYFIFLTGKGELR
THKYTNGHLRSFAPFNNVNCPQGFLSFDTSYDLKICVLPPYLSYDSPWPARKVPLRCTPK
QIVYHRENRVYCLITQTEEQTNKYFRFNGEDKELTEENKGERFIYPTMSKFTMVLMSPET
WEIVPDASIEFENWEHVTAFKIVKLAYEGTRSGLKEYLCIGTNFNYSEDITSRGNIHIYD
IIEVVPEPGKPLTKFKLKEIFKKEQKGPVSAISDVLGFLVTAFGQKIYLWQLTDDDLIGV
AFIDTNIYVHEIISIKSLILIADVYKSVSVLRFQEEFRTLSLASRDFYPLEVFGIEFMVD
NTNLAFLVSDAEKNFIVYMYQPEVRESIGGQKLLRKGDYHLGQTVNTMFRVQCHQRGPVQ
RQPFTYENKHFVVYGTLDGGMGYCLPLPEKVYRRFLMLQNVMLSYQEHLCGLNPKEFRTI
KMAKKLSINPSRCIIDGDLIWSFANMTVAERNEVAKKIGCKTEDILQDLLEIERITTVF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgtgtgtaaacaatctcacccagccactggtgtggaatttgcaataacttgt
cggttctttaataatgtcgatgaaaatgtggttgttgccggtgccaacattctcaaggta
tatcgaattatacccaatttagatgtatcacagcgtcatgcgaaaataaatcccaacgag
ctacgaaatcctcccaaaatgcgtttggagtgtttggcctcctataccctgtatggtaat
gtcatgtcgttgcaaagtgttaccctgacaggatcaatgcgagatgccctgttgattagc
tttaaggatgcgaaattgtccgtggtacaacacgatccagatacgtatgccttgaaaact
ctctcgttgcattacttcgaggaggaagacattaaggatggttggacgggaagatattac
atacccatggtacgagtggatcctgatgctcgctgtgccgtaatgctggtgtacggcaaa
cgtttggtggtgctaccatttcgcaaagaaaacggcatcgatgaaattgaattggccgat
gtgaaaccgattaaaaaggcaccgacagcaattatgtctaggacacccattttggcttcg
tatttgatagctctacgtgatttggatgagaaaattgacaatgttttagatttacaattt
ctgcatggttactatgagccgacattgctgattttgtatgagccggtaaggacctttacg
ggcagggtggccgtacgctccgatacctgtgttttggtggccatttccctgaatatccag
caaagagttcaccctattatatggaccgtgacgggattgccgttcgattgtttacaagta
ttcccgatacaaaagcccattggaggttgtttggtgaccaccgtcaatgctataatttat
ttaaatcaaagtgtcccaccctatggagtgtcgttgaacagttcggcggatcatagcacc
agttttcctttaaaacctcaggatggtgtgcgcattagtttggatgctgccaatattgcc
ttcattgatgtggacaaactggtggtgtctttgcgaacgggtgatttgtatgtggtaaca
ttgtgtgtggattcgatgcgaactgttcgaaatttccatttccacaaggctgcggcaagt
gtcttgaccagctgcatgtgtgtgtgccaaagtgaatatttatttttgggttcacgtttg
ggcaattccctgttgctgcattttacggaggaagatcaaagtacggttatcactctggac
gaatatgatggcacagacggcagtgggggaggtggcggcggaggaggagcaggagatgaa
aatcgcaaagccagacgcattgaagatgaagaacttgaggtgtatggttccggggccaag
acctcggtacaattgagaaaatatattttcgaggtatgtgatagcttgctgaatgtgggc
cccattaatttcatgtgtgccggagaacgtgtggagttcgaagaaggaggtaccacgtta
aagcctcaggccagtcagttggcggatttgaaaatcgatattgtggcctcggtgggccat
agcaaaaatggggccctttgtgtctttgccaattgcattaatccccaggtgattacctcc
tttgaattggatggctgcttggatgtttggacggtattcgatgatgttagccgaaaaatg
agccaccatgaccatcatgactttatgattctgtcacaaaaaacgtctactttggtcctg
cagacgggtgaggagatcaatgaaattgaaaacacgggctttagctacaatcagcccacc
atttttgtggggaatttgggacaaaatcgtttcattgtccaggttacaacccgttcggta
cgtctgttgcaagggaaacgtttgatacaaaatgtacccatagacgagggagctcccgtg
gttcaggtgtccattgccgatccctatgtctgcctaagggtgttgcatggcaaagtcatt
acgttagctttgcgcgaaaccaagggcacacctcgcctggccattaataaaaacaccatc
agcagtgttccagcggtcatttctttgtcggcttacaaggatctttcgggactatttacc
acgaaatccgatgatgttttgaatttgacgggtggcagtggcaactccctttatgccggc
ctgggttacatgaaggccgagccaaacatgaaaattgaagatgaagaagatttgctttat
ggtgaatccggaaatgccttcaaaatgaacagcatggccgatctggccaaacagtcgagg
caaaagaattccgattggtggcgtagattgctgttgcccgtaaaatccacctattggttg
gtggtgggccgtgaaagtggcaccttggagatatattccatgccggatatgaagttggtg
tatctcgtcaatgatattggcaatggcgatattatactcacggattccatggagtttgtg
ccggcaaatctgaaccagccggataataagcaaggtattctgctgaattgcatgccccag
cataccaactccccgttgcccttggaagtggcgctggtgggtttgggttatcagggaaat
agaccgctgttgatgatacgcacccgtttggagttacttatctatcaggcctatcgctat
gccaagggtcacatgaaggtgcgatttaaaaaattaaatagtctcaatatgagggacgac
agcggtggcgaccaaaccatggaaattgatgatgatagctcggaactggaatcgtataac
cttcaagaacgctatatcaaccggttgagatacttttcaaatatctccggtttgaatgga
gtcgtggtgtgtggcccaaatccctattttatttttctcaccggcaagggtgagttgcgg
acccacaagtacaccaatggtcatttgaggagttttgccccatttaacaatgtcaactgt
ccacagggttttttgagcttcgataccagctacgacctgaagatttgtgttttacctccc
tacctgagctatgattcgccctggccggcccgcaaagtaccgctgcgttgcacccccaaa
caaattgtctatcatcgagagaatcgggtctattgcttgattacacaaacggaggagcaa
acaaataaatatttccgtttcaatggcgaagacaaggagctgacagaggagaataaaggt
gaacgtttcatataccccaccatgtcaaagttcaccatggtcctgatgagtccagagacg
tgggaaattgtgccggatgcctcgattgaatttgaaaactgggaacatgtgacggctttt
aaaattgtcaaattggcctatgagggtacccggtccggtctcaaggaatacctttgcatt
ggtacgaatttcaattacagtgaagacataacttcgagaggaaatattcacatctatgac
atcatcgaagtggtacccgaaccgggcaaacctctgacgaaatttaagttaaaagaaata
tttaaaaaagaacaaaagggtccggtgtcggccatttccgatgttttgggtttcttggtc
acggcctttggccagaaaatctatctatggcagctgaccgatgatgatttgattggtgtg
gccttcattgacaccaacatctatgtgcacgaaattatatccatcaaatccctgatactg
atagcagatgtttataagtctgtgagtgttctacggttccaggaagagtttagaacactg
tcgctggcttcgcgggacttttacccccttgaggtatttggcattgagtttatggtggac
aacacaaatctggcatttttggttagcgatgccgaaaagaatttcattgtttacatgtac
cagccggaggtgcgggagtcaattggaggccaaaagctgttacgcaaaggagactatcac
ttgggccagaccgtcaacaccatgttcagggtgcaatgccaccagcggggtcctgtgcaa
cgtcaaccctttacctatgagaacaaacattttgtcgtctacggcaccctggatggtggc
atgggttactgtttacccttacccgagaaagtttatcgtcgctttttaatgttgcaaaac
gttatgctgtcgtaccaggagcatttatgcggtctaaatcccaaagaattccgaacaata
aaaatggccaaaaagctgtcgataaatccaagtcgttgcatcattgatggcgatctgata
tggtcatttgccaatatgacagtggccgaacggaatgaagtagccaagaaaattggctgc
aagacggaggatattctgcaggatctattggaaattgagagaataacaacagtgttttga
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integrated database retrieval system
