Musca domestica (house fly): 101893573
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Entry
101893573 CDS
T03448
Name
(RefSeq) uncharacterized protein LOC101893573 isoform X3
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mde
Musca domestica (house fly)
Pathway
mde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101893573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mde03021
]
101893573
03019 Messenger RNA biogenesis [BR:
mde03019
]
101893573
Transcription machinery [BR:
mde03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101893573
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101893573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_C
zf_PCFS4
Pcf11_helical
Pfc11_Clp1_ID
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
101893573
NCBI-ProteinID:
XP_005178854
UniProt:
A0A1I8N827
LinkDB
All DBs
Position
Unknown
AA seq
2011 aa
AA seq
DB search
MDIATKTQRECEERVAEEYLSSLSDLNCNSKPLINMLTMLAEENIEYAPVIVKVVEQHIA
KVPPEFKLPILYLIDSIVKNVKGTYVQLFSQCIVSLFCGVFEKVNEKIRERMYALRQTWN
EVFSAQKLYALDVKVKRLDNNWPITAKQPSIHVNPNFLKTANQAIPTEMEKILQDKTREL
LELKKRKLELELEATKKHLEEQEKQFSKTAEGVLPPVDALVVANALQTVGIRPPANASIA
GQVMPGVMAPGFMATPGVAINPLRPPMYHHNFRGLRPNLHHPGMINEPTQQNIPPMVNMP
TVAAGNNANKPRVHPVNSALISSVRQRDPRLLRQQQQQQQQQQQQSNQQPPTAANVPSTA
SSHGEQQSDTKSNNRNDRGHKSSRSKSPTRSSSSNSTSGSRSSSTRSSSKSSSRDKERDR
KRSDSKGSSSSSSTSSNVERKKSSYASSYGKSDKSSSSSTKCDKDAFEIAPLSSAFKRKS
SSPSSSPSKSRDSKRSNKSSRSGRSKTSSRSPSPESAAESYKDSGSHSRRMSTTSSSSSM
LASSPEKQRLPKITDMEMTDIGGEDVKTSIVDTTTATAAAAAASSANNTDKKKLLSDDHS
SSSSSSPAAMESKMEPKESKPEHTKMETTGSGGSVDGQVSKDHHPEEDVKKRPLAPIKDE
EPLAKKSKPTKLDNLFGSEDVDLRQLMPPISGNTAEETAPPPPSFSVTNETNENWDNVKT
DGSSKPTSNIKKSSLDDVRAKLAKTAKLNKMLKLDKTNRDLEQRNKLAELQMNEDTQEAN
DEKIRTMIAQAQELLESKSINQDQYKNLVKTVMSINEDNKLKEAKRRESLNTFKDKIIGN
DDNASNDSERNAARDAVLRKRIPKISKTTAGNDSPVSSGEGNLDEPMRLVDDKHNTDSNE
EQNMRAAGNNRRDKRGNKTSKWGDRVIEPPNANAMMPGGVGPMQQQRPWNNMMVPNKRGG
PPGSSMGFRPNMPPNNRPPWPMGGGGGGGVLGNNMPQHFGKGGNNNPIVGPMRGMPPMAG
SGSVIPPPMMPKPCNSIDNPQEDIVRTITIDGCAKEIRFYDDIAIVFMEVDQPREIGFQN
GQRTIFIDNHEPITLQFNHDYKPVTIDGETLNLRFGSPSRELFIDEHWYEIYFGGPPITV
PIRNKMHMLKAEGPPPQVNIGPLRRDLVVGKINMIVDAHNVIPLFLDARIQSFRLGEVEH
TVQFADNLLTVLLDGAPTRVEYGGLPKSLYLGANKYFIRFGALPQGVVAGKVQIKNMIYV
ETKPPVSSEIMASTNTNPLTTEAAMSQQAELQKPAEPTVPILPAAALSNLNIDELFQKLV
STGILGGASGILPALNTNSSTVPATPAASSSSTTETAATGKIATTTNTTETEETSAAIPP
SSQPPMEASKPIDLSKPESIKTRQAAIVNTLFSGMQCSSCGVRFPPEQTIKYSQHLDWHF
RQNRRERDSSRKAHARKWYYELNDWIQYEEIEDLDEREKNFFETPQTDVEIMDETSNQRS
TNSPIQSCPAGPDDVDRACDMCQERFEQFYNEELEEWHLRCAIRVEDKIYHPLCYEDYKA
SLNPPTPPPKEMETNEEDVAEEPSLIQIDDDNAVDIVIKVEEDDSKEKNPTTSKHDDDDD
DVIVLPNEEPSVTEIDDDDDEYVPANVTREQMGNIHEDDDGELNETTESDVEIQEPHIPF
TDLDTYVEKELPEPEAGVGFMNIKIKQEPNADEEDEDDGFEDVGTVLIAPEEISIHSSEE
TQTQTIESSTSALSPGQQERPASTPSVVNEDTETTTDNPPATDLNISMDGNMETGDEHNL
SAVGLAPTMPLASLVNKIKINITKNSVNPNSTGGSSNSSASNHNSKNYLGSEQSKGNLGG
GSSTSTSSSTAAATSTFNHIPTISTIPVLCGGGTTICSTQSSVVGGGSMLFEEHSNPIPS
IASENSVSTISVIGSIYGNNGPTATVSRTIPQANVVVPAAKQPPPPAKTPTPPPVEDTIT
YELKPALQKASLRKKEKVVCGNETSGLCSIM
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgctacgaaaacccaacgagaatgtgaagaacgcgttgccgaggagtatcta
tccagtctgtcggatttaaattgcaacagcaaaccgcttataaacatgctaaccatgttg
gccgaagaaaatatcgaatatgccccagttattgtaaaagtcgttgaacaacatatagca
aaggttccaccagaatttaaattgcccatattgtatttaatcgattcaattgttaaaaat
gtcaaaggcacatatgtgcaactgttcagccaatgtattgtcagcttattttgtggagtt
ttcgaaaaggtcaatgaaaagatcagagaaagaatgtatgccctgaggcaaacatggaat
gaggtattttcagcccaaaaactctatgccttggatgtcaaggtaaagagattggacaac
aattggcccatcacagcaaaacaaccgtcgatacatgttaatccaaattttttgaaaacc
gcaaatcaagccatacccacagaaatggagaaaattctacaggataaaactagagaattg
ttggagttaaagaaacgtaaacttgaattggagctagaagccaccaaaaaacatttggaa
gagcaggaaaaacagttttccaaaactgcagagggtgtcttaccgcctgttgatgccttg
gttgtggccaatgccttgcaaacggttggtataaggccacctgccaatgcctccattgcg
gggcaagttatgccaggagttatggctcctggttttatggcaacccccggtgtggccatt
aatcctctaaggccgcccatgtatcaccacaatttccgaggtttacgaccaaacctacac
catcctggcatgataaatgaaccaacacaacagaatattcctcccatggtgaatatgccc
acagttgctgctggaaataatgccaataaaccccgcgttcatcccgtcaattcggcattg
ataagttcagtgcgtcaacgtgatccacgtttgttgcgtcaacaacaacagcagcagcaa
caacagcaacagcaatctaaccaacagccgcctactgctgccaacgttccctcaacagca
tcatcacatggcgaacagcaatcggacacaaagtcaaataatcgcaatgatcgaggccac
aaaagtagtcgcagcaaatcacccacaagatcaagctcatccaattccacaagtggcagt
cgctcttcctcgactcgctcttccagcaaaagttccagtcgtgacaaggaaagagatcgc
aaacgttccgattccaaaggttcatcatcatcttcctccacctcatccaatgttgagcgc
aaaaagtcatcatatgcctcatcctacggcaaatcagacaaatcatcatcatcatccaca
aaatgtgataaagacgcttttgaaattgctccgctatcgagtgcattcaaaaggaaatca
tcatcacccagttcctcaccgagtaaatcacgtgattcgaaacgttcgaataaatcctct
cgttcgggacgtagtaaaaccagttcacgcagtccttcacccgaatcggcagctgaaagt
tataaagatagtggatcacacagccgtagaatgtccacaacatcatcatcatcgtcaatg
ttggcttcatcgccggaaaaacaacgtttacccaaaatcaccgatatggaaatgacggat
attggcggcgaggatgtaaaaaccagcattgtagacacaacaacagctacagctgctgct
gctgctgcttcgtctgcaaataatacagacaaaaaaaaactactctccgatgaccattca
tcctcatcatcatcatcgccagcggctatggaaagcaaaatggagccgaaggaaagcaaa
ccggagcacactaaaatggaaacaacaggtagtggtggttcagtggatggtcaagtaagt
aaagatcatcatccagaggaagatgtcaaaaaacgacccctggctccaataaaagatgag
gaacccctggccaaaaagagtaaaccaacaaaacttgataatttatttggttccgaggat
gtagatttgagacaattaatgccacccattagcggaaatacagccgaagaaacagcccca
ccacctccctcgtttagtgtgacaaacgaaaccaatgagaattgggacaatgtcaagact
gatggcagttctaaaccaacctctaacattaagaagtctagtctagatgatgtcagggcc
aaattggccaaaactgctaagttgaataaaatgctgaaacttgataaaacaaatcgtgac
ttggaacagcgcaacaaattggccgaactgcaaatgaacgaagacacccaggaggcaaat
gatgaaaagatacgcaccatgattgcccaggcccaagagctattggaatcgaaatcgatt
aatcaagatcagtacaaaaatctggtcaaaacggtgatgtccattaatgaggacaacaaa
ctgaaggaggccaagcgacgtgaatcgctcaacacgttcaaggataaaatcattggcaac
gatgacaacgccagcaatgattcggaacgtaatgccgcccgcgatgcagtcctaaggaaa
cgtataccaaaaataagcaagaccacggcaggaaatgattcccctgtaagcagtggtgag
ggtaatttagatgaacctatgcgtctggtggatgataaacataacaccgactccaatgag
gaacagaatatgcgtgctgcagggaacaatcgcagggataaacgtggcaacaagacctca
aaatggggtgatagggtgattgaaccccctaatgccaatgccatgatgccaggtggtgtg
ggtccaatgcagcagcaacgaccttggaataatatgatggtaccaaataaacgaggtggc
ccgccgggaagttccatgggtttccgacctaatatgccgcccaataatcggccaccatgg
cccatgggcggtggtggtggtggtggcgtgcttggcaataacatgccccaacactttggg
aaaggaggtaataacaatcccatcgttggtcccatgcgtggcatgccaccaatggccggt
tctggctctgttataccaccccctatgatgcccaaaccctgcaattccatcgataatccc
caggaagacattgttcgcaccattaccattgatggctgcgccaaggagatacgtttctac
gatgacatagccattgtctttatggaggtggatcagccacgtgaaattggttttcaaaat
ggccagcgaaccatattcattgacaaccatgagccgatcaccctgcaattcaatcacgac
tataaacccgtgaccatcgatggtgaaaccttgaatttacgtttcggctctccctcccgc
gaactgttcatcgatgaacattggtatgaaatttactttggtggtccacccatcaccgtg
cccatacgcaacaaaatgcatatgctcaaggccgaaggaccaccgccccaggtcaacatt
gggccactgcgccgggatttggtggtgggcaaaatcaacatgattgtggatgcccacaat
gttataccgctctttttggatgctcgcatacaaagtttccgcctgggcgaggtggaacat
acagtgcaatttgctgataatcttctaactgttctcctagatggagctcccacccgtgta
gaatatggtggcttaccaaaaagcctatacctgggggcaaataaatacttcatacgtttt
ggagcattgccacagggtgtggttgcaggaaaagtacaaattaagaatatgatttatgtg
gaaaccaaacctccggttagcagtgaaattatggccagcaccaacactaatcccctcaca
actgaggcggccatgagccagcaagccgagctacagaaaccagcagagcccacggtgccc
atactgccagctgcggccttgagtaatctaaacattgatgaattgttccagaaactggtg
tccaccggtatactgggaggggcaagtggtatacttcctgctcttaatacaaacagcagc
actgtgccagccacaccagctgcaagcagttcttccacaacggaaacagctgccaccggc
aaaatagccaccacgacgaacaccacagaaactgaagaaacctctgccgccattccacca
tcctctcaacccccaatggaagctagtaaacccatagatctgtccaagcctgaatcgata
aaaacacgacaagcagccattgtcaataccctcttctcgggcatgcaatgcagcagctgt
ggcgtccgtttcccacccgaacaaaccataaaatatagccaacatttagattggcatttc
cggcaaaatcggcgtgaacgtgactcgtcacgcaaagcgcacgcccgcaaatggtattat
gagctaaacgattggatacaatacgaagagatcgaggatttggatgagcgagaaaagaat
ttctttgaaacgccccaaaccgatgtggaaataatggatgaaacatccaatcaacgttcc
accaattcacccatacaaagttgccccgccggtccggatgatgttgatcgggcatgtgat
atgtgtcaagagcggtttgagcaattctacaacgaagaattggaagaatggcatttacgt
tgtgccatccgcgtggaagataaaatctatcatccgttgtgttatgaggactataaggca
tctttgaatcccccaacgccgccgcccaaagaaatggaaaccaacgaggaagatgttgcc
gaggaaccctctttaatacaaatcgatgatgacaatgctgtcgatattgtcataaaggtt
gaagaagacgatagcaaagaaaaaaatcccacaacatcgaaacacgacgatgatgatgac
gatgtcattgttttgcccaacgaagaaccatccgttacggagattgatgatgacgacgat
gaatatgtgccggcaaatgtgacacgtgaacaaatgggtaatattcacgaagatgacgat
ggcgaactcaatgaaacaacagaatctgatgttgaaatacaagagccccatatacccttt
actgatttggatacgtacgtggagaaagagttacccgaacctgaggcaggtgtgggcttt
atgaatatcaaaatcaaacaagaacccaatgcggatgaggaagacgaagatgatgggttt
gaggatgtgggcaccgtgttgattgcccccgaggagatttccatacacagtagtgaagaa
acccagacacaaaccattgaatcgtcaacatcagccctgtctccgggccaacaggaacgg
cccgcctcaacgccttcggttgtgaatgaagacacggaaaccacaacggacaatccaccg
gccacagatttaaatatttccatggatggcaatatggaaactggcgatgaacataacctc
tctgccgttggcttagctcctacaatgcccttggctagtttagttaataagatcaaaata
aatattaccaagaacagtgtaaatcccaatagcaccggtggtagtagtaatagctcagcc
tcaaatcataattctaaaaattatttgggtagtgaacaatcaaagggtaatttaggtggt
ggtagtagtacttcgacatcatcctccactgctgcagcaacgtccacattcaatcacata
ccaacaatatcaaccataccagttttgtgcggtggcggaacaacaatttgtagcacacaa
tcctctgtggttggtggtgggtccatgttgtttgaggagcactccaatccaataccctcc
attgccagtgagaacagtgtaagtaccatatctgtaataggcagtatttatggcaataat
ggtcccacggcaactgtaagtcgaaccataccccaggccaatgttgttgtgcccgccgcc
aaacaaccaccaccacctgccaaaacaccaacaccgcctcccgttgaagataccatcacc
tatgaattgaaaccggctctgcaaaaagcatccctgcggaaaaaggagaaggtggtgtgt
ggcaacgaaacatctggactgtgttccataatgtaa
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integrated database retrieval system
