Musca domestica (house fly): 101893909
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Entry
101893909 CDS
T03448
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mde
Musca domestica (house fly)
Pathway
mde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101893909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101893909
03041 Spliceosome [BR:
mde03041
]
101893909
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101893909
Spliceosome [BR:
mde03041
]
Complex B
Other components
Prp19-related factors
101893909
Complex C
101893909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
Suf
Mad3_BUB1_I
TPR_15
ARM_TT21_C
RPN7
TPR_10
ARM_TT21
PPR
Motif
Other DBs
NCBI-GeneID:
101893909
NCBI-ProteinID:
XP_005178581
UniProt:
A0A1I8M786
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MTITGVPSLLMEIDFPDEDVPYEEEILRNAYSVKHWLRYIDHKARAPNNAVNIVYERALK
ELPGSYKIWYNYLRTRRKQVRGKCITDPMYEEVNNTFERALVFMHKMPRIWMDYGSFMTL
QCKITRTRHVFDRALRALPVTQHHRIWPLYLKFVKKFDIPETGVRVFRRYLKLAPDDAEE
YIEYLLSVNRLDDAAQQLASIVDNEHFASKHGKSSHQLWTELCELISKNPDKVHSLNVDA
IIRGGLRRYTDQLGHLWNCLADYYVRSGLFDRARDIYEEAIQTVRTVRDFTQVFDEYAQF
EELSLNKRMEMVANDPEATEEDDIDVELRLARFEHLMDRRLLLLNSVLLRQNPHNVHEWH
KRVKLYEDKPHEIINTYTEAVQTVQPKLAVGKLHTLWVEFAKFYESNGQVDDARVVFERA
TEVEYVKVDDLASVWCEWAEMEIRQENFEEALKLMQRATVMPKRKVAYHDDAETVQMRLY
KSLKVWSMYADLEESFGTFKTCKAVYDRIIDLKICTPQIIINYGLFLEEHNYFEEAFRAY
EKGIALFKWPNVYDIWNAYLTKFLKRYGGSKLERARDLFEQCLENCPPEHAKYFYLLYAK
LEEDHGLARHAMAVYDRATSAVKPEEMYDMYNIFVKKAAEIYGLPRTREIYEKAIETLPE
ENMRQMCVRFAEMETKLGEIDRARAIYAHCSQVCDPRITAEFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFMTSNAPADAAGTDAMRQLDAKATEAAATQQQKLPPQ
PPKPSGASNIMFVRGETQGGAARDKVVNPDEIDIGDSEDEDDEEEDGDDDDGTNGNDNSK
ATRKDDNDNVMKKLRIEQKSIPAKVFGGLKTKANNDDEEEDD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaccataacgggagtaccatctcttttgatggaaattgattttccggatgaagatgta
ccctatgaagaggagattctacgcaatgcctattccgtgaaacattggctacgttacata
gatcacaaggcgcgggcacccaacaatgctgtgaatattgtttacgaacgggctctgaaa
gaactgccgggaagttacaagatttggtataactacttgcgtacccgcaggaagcaggtt
cgcggcaaatgcatcacagatcccatgtacgaagaggtgaacaatacctttgaacgggca
ttggtgtttatgcataaaatgccacgtatttggatggattatggaagttttatgacactg
caatgcaagattacccgcacgcgtcatgtgttcgacagagccttgagggcattgccggtg
acacagcatcatcgtatttggccattatatttgaaatttgttaagaaattcgatataccc
gaaacgggcgttagggtgtttcgccgttatttgaagctggcacccgatgatgcggaggag
tacattgaatatctgttgagtgttaatcgtttggatgatgctgcccagcagttggccagt
attgtagataatgaacatttcgcctcgaaacatggcaaatcgagtcatcaattgtggacg
gagttgtgtgaattgatttcaaagaatccggataaggtgcactcgttgaatgtggatgcc
attataaggggagggttgaggagatataccgaccaattgggccacttgtggaactgcctg
gctgattactatgtacgctcgggcctgtttgatcgtgcccgtgacatctacgaagaagcc
atacaaaccgtgcgcacggtgcgtgactttacccaggtctttgatgaatatgcccagttt
gaggaactctctttgaataaacgcatggaaatggtggccaatgatcctgaggccaccgag
gaagatgatattgatgttgaattgcgtctggcccgtttcgaacatttgatggacagacgt
ttactgctactaaattccgttttattgcggcaaaatccccacaatgtccacgagtggcat
aaacgtgtcaagctctatgaggacaaaccccatgaaatcatcaacacctacaccgaggct
gtccagacggtacaacccaaattggccgtgggaaaattgcataccctttgggtggaattt
gccaaattctatgaatccaatggccaagtagatgatgcccgggtggtgttcgagcgggcc
accgaagtggagtatgtcaaggtggatgacttggccagtgtctggtgtgaatgggctgaa
atggaaatacgacaagaaaactttgaggaggccttgaagttgatgcaaagggccaccgtc
atgcccaaacgcaaggtggcctatcatgatgatgcggagacggtgcaaatgcgcctctac
aaatctctcaaggtgtggtctatgtatgccgatttggaggagtcctttggcaccttcaag
acctgtaaggcggtctatgatcgcattatagatttgaaaatttgcaccccccagatcatc
atcaattatggcctctttttggaggagcacaactactttgaggaagccttcagggcctat
gaaaagggcattgccctcttcaaatggcccaatgtctatgacatttggaatgcctatttg
accaagttcttaaaacgttatggtggctccaaattggaacgggcacgtgatttgtttgaa
caatgcctggaaaattgcccacctgaacatgccaagtatttctatttgttgtatgccaaa
ttggaagaagatcatggcttggcaagacatgccatggcggtatatgatagggccaccagt
gccgttaagcctgaggaaatgtatgatatgtataatatctttgtgaaaaaagctgccgag
atttatggcttgcccaggaccagggagatttatgaaaaggccattgaaacattgcccgag
gagaatatgcgtcaaatgtgtgtgcgttttgctgaaatggaaacgaaactgggtgaaatt
gatcgagcccgggcaatttatgcccattgttctcaggtctgtgatccccgtattacggcc
gaattctggcaaacctggaaagagtttgaggtacgccatggcaatgaggataccatgcgt
gaaatgttgcgcattaaacgctccgtacaggccacttataatacccaagtaaatatgatg
gctgcccaatttatgacctccaatgccccggcagatgccgctggtaccgatgccatgcgt
caactggatgcaaaggccaccgaggcggcggccactcaacaacagaaacttccgccacaa
ccacccaaaccctctggggccagcaatattatgtttgtacgcggcgaaactcaaggtggt
gcggccagagataaagttgttaatcccgatgaaattgatatcggtgatagtgaggatgaa
gatgatgaggaggaggatggtgatgatgatgatggcaccaatggcaatgacaactcaaag
gccacacgcaaggatgacaatgataatgtcatgaaaaaattgcgcattgaacaaaaatca
ataccagccaaagtttttggtggcctaaagacaaaagcaaataatgatgacgaagaggag
gatgattag
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