Musca domestica (house fly): 101896679
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Entry
101896679 CDS
T03448
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mde
Musca domestica (house fly)
Pathway
mde03013
Nucleocytoplasmic transport
mde03015
mRNA surveillance pathway
mde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101896679
09122 Translation
03013 Nucleocytoplasmic transport
101896679
03015 mRNA surveillance pathway
101896679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101896679
03041 Spliceosome [BR:
mde03041
]
101896679
Enzymes [BR:
mde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101896679
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101896679
Spliceosome [BR:
mde03041
]
Complex C
Other components
EJC/TREX
101896679
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101896679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
MoaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
101896679
NCBI-ProteinID:
XP_005176315
UniProt:
T1PBI2
A0A9J7HXE9
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPSVKVGVFFGGLSIQKDEETLKNVTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNXKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgatcttttggattacgaggatgaggaacagaccgagaccactgta
gccgagacacaagaggcgccaaaaaaagatgtaaaaggtacctatgtgtcgatacacagt
tcgggttttcgtgatttcctccttaagcctgaaattctaagagccattgttgattgcggt
tttgaacatccatctgaagtgcaacatgaatgtattccccaggctgtattgggcatggac
attttgtgccaggctaaatctggtatgggtaaaactgctgttttcgtgctcgccacactt
cagcaacttgaacccaccgagaatgttgtctatgttctagtcatgtgtcatactcgcgaa
cttgcattccaaattagcaaggagtacgaacgtttctctaaatatatgccttccgtaaag
gttggagtcttctttggcggtttgtccatacaaaaagatgaggaaactttgaagaatgtc
acaccacacattgttgtaggcacacctggtcgcattttggctttgatacgcaacaagaaa
cttaacttgaagcatttgaaacatttcatccttgatgaatgtgataaaatgttggaacaa
cttgatatgcgacgcgatgttcaggagattttccgcagtacacctcatggaaaacaagtt
atgatgttttccgccaccttaagcaaagacattcgtccagtttgcaaaaaattcatgcaa
gatcccatggaagtgtatgtggacgacgaagccaagttgacattgcatggcctgcagcag
cattatgtcaagctaaaagaaaatgagaaaaacnaaaaattatttgaacttttggatgta
ttggaatttaatcaagtcgttattttcgtaaaatcggtacagcgttgcatggcactggcc
cagctattgacagaacaaaatttccccgccattggtattcatcgtggcatgactcaagag
gaacgtctgaaccgttatcagcaattcaaggatttccaaaaacgtattttggtggccaca
aacttgtttggacgtggcatggatattgaacgtgtcaatattgttttcaactatgatatg
cctgaggattcggacacctatttgcatcgtgtggctcgtgctggtcgctttggtaccaag
ggtttggccattacctttgtttcggacgaagccgatgccaagattctgaatgaagttcaa
gatcgtttcgatgtgaatatcacggagttacccgatgaaattgatttatcctcttacatt
gaaggccgataa
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integrated database retrieval system
