Musca domestica (house fly): 101898019
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Entry
101898019 CDS
T03448
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mde
Musca domestica (house fly)
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mde03009
]
101898019
Enzymes [BR:
mde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101898019
Ribosome biogenesis [BR:
mde03009
]
Eukaryotic type
Pre-60S particles
Helicases
101898019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
DUF4897
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
101898019
NCBI-ProteinID:
XP_005182714
UniProt:
T1PH82
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MTEKRKIKQFHEMELDDRILKAISKMGWSEPTLIQEAAIPLLLEGKDVIVKARTGSGKTA
AFALPLIQKILNSKLNAAEQCISALVLAPSKELCQQTRKAMEQMSEKCGKVLRVVDLSSS
DTVAQRHVLSERPDVVVTTPAKVLAHLQSGAMDLKHLETLVVDEADLVFSFGFEKDVKKL
VEYLPPIYQAVLVSATITEDVMNMKNIILNNPVILKLEEPELVPESQLSHQRILAEELDK
PAILYALLKLRLVRGKNVIFVNSVDRCYKLKLFLEQFSIKSCVLNSELPAKIRIHTINQF
NQGIYDFIIASDEHMLENPGRNKSDRESGASRGIDFQCVTNVINFDFPKDVNSYIHRAGR
TARGNNKGTVLSMVSIKDKEINDEVEERLKAGYMSEEQVIKNYQFKMEEVEAFRYRAKDA
WRAVTRTAVHEARVREIKQEIFNSEKLKAFFSENTRDLQVLRHDKPLKTVKVQPHLSHVP
EYIVPKALKRIATTPLTTSSASSSTSKKPRYFNSSAKAAYESKASNPLLCSEIDFGKKTG
GNRRRK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaacgtaaaatcaaacaattccatgaaatggaattagatgatcgtattcta
aaggccatatcaaaaatgggctggagcgaacccacattgatacaagaggccgccatacct
ttgttattggaaggtaaagatgtcatagtcaaggctcgcactggttctggcaagacagca
gcctttgccttgcccttgatacaaaagatcctcaattccaaattgaatgctgccgaacaa
tgtatcagtgccttagttttggctcccagcaaagaactttgccaacagacacgcaaagct
atggaacaaatgagcgaaaaatgtggtaaagttttgcgtgttgtcgacttgtcatctagc
gacactgtggcacaacggcatgttctctccgaaagacctgatgttgttgtaaccactcca
gctaaggttttggcacatttacaatcgggcgcaatggatttaaaacatctggaaacattg
gtagtggatgaagccgacttggtgttttcatttggttttgagaaagacgtaaagaaatta
gttgaatatttaccaccaatttatcaagccgttttagtctcggccacaataaccgaagat
gtgatgaatatgaaaaatatcattttaaataatccggtaattttgaaacttgaagagcca
gagctggtgccagaaagtcagctgtctcatcagcgcatcttggccgaagagctggataaa
ccggcaattttatacgctttgctaaaattgcgtttggtacgtggcaagaatgttattttc
gtcaactcagtggatcgttgttataagttgaaattattcttggaacaatttagcataaaa
tcctgcgtcctcaactcagaactgccggcaaaaattcgcattcatactattaatcaattt
aatcaaggaatttatgattttattattgcctctgatgaacatatgttggaaaatcctggt
cgcaacaaatctgatcgcgaatcgggagcatcaagaggcattgatttccaatgtgtcacc
aatgtcattaatttcgattttcccaaagatgtgaattcttatatccacagagcgggacga
acggctagaggaaataataagggtacggttttgtcaatggttagcataaaggataaggaa
atcaatgatgaggtggaggagcgtctaaaagcgggttacatgagtgaggagcaggttata
aaaaattatcaattcaaaatggaagaagttgaggcattccgctaccgtgccaaagatgcc
tggcgtgctgttacccgtaccgcagtccacgaggctcgtgtacgtgaaattaaacaggaa
attttcaatagtgaaaaactgaaagcattctttagcgaaaacactcgggatttgcaagtg
ctgcgtcatgacaaacctttgaagacagttaaagtacagccccacttatcacatgttccc
gagtacattgtgccaaaggcattgaaacgtattgccacaacacctctaacaacatcgtcc
gcatcgtcatctacctcaaagaaaccacgttattttaattcttctgcaaaggctgcctat
gaaagtaaggccagcaatcctctgctgtgtagcgaaattgattttggcaaaaagaccgga
ggcaatcgacgtcgtaaatga
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