Musca domestica (house fly): 101899223
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Entry
101899223 CDS
T03448
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
mde
Musca domestica (house fly)
Pathway
mde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101899223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101899223
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101899223
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101899223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101899223
NCBI-ProteinID:
XP_005179504
UniProt:
A0A1I8M9L1
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MANVALSEAEKTFILHGVEEDFRCDGRSRRDYRPMELECEIVNNASGSARLRLANTDILV
GVKCEIDTPTSLHPDQGKIEFFVDCSANATPEFEGRGGEELALELADTLTNAYESPSAFD
LKSLCILPGQHCWKLYVDILILECGGNLFDAVSLASKAAIFNTRIPKVTAAVMDAGEAEL
LISDDPYNCTRIEIDNIPILVTVCKIGDCCVVDPSAEEEQCSTASLVVGVSKRNNKCYVS
HTHTVGGGSLHKDTMYKCLNLGVTAGATLNDALEKALRLEESRVGNKRKETVGFLK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtagcactaagtgaagctgagaaaacctttatattacatggtgttgaggag
gacttccgatgtgatggtcgttcgcgccgtgattatcgtcccatggaattggaatgtgaa
atagtaaacaatgccagtgggtcggcaagattacgtttggcaaatactgatatcctggtt
ggtgtgaaatgcgaaattgatacacccacatcattgcatccggatcaggggaaaattgag
ttctttgttgattgctctgctaatgccacacctgaatttgagggcagaggtggtgaagaa
ctagccttagagctggccgatactctaacgaatgcctacgagtcaccttcagcctttgac
cttaaatcattgtgtatattaccggggcaacattgttggaaactctatgtggatattctg
attttagagtgtggtggaaatttatttgatgccgtgtcattagcatccaaagcggctata
ttcaatacaagaattcccaaagttactgctgctgttatggacgctggagaggctgaattg
ttaatttccgatgacccctataattgtacacgcattgaaattgataacattccgatattg
gtaacagtttgtaaaataggagattgttgtgtggtagatccctcagccgaggaagaacaa
tgcagtacagcaagtttagtagtgggagtctcgaaaagaaataataaatgttatgtctca
catacacacactgtaggtggtggatcattgcacaaagacaccatgtataaatgtttaaac
ttgggcgttacggctggtgcaacactcaacgatgccctcgagaaagccctgcgtttggaa
gaatcccgtgtgggaaacaaaaggaaagagactgttggatttttgaaatga
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