Musca domestica (house fly): 101900513
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Entry
101900513 CDS
T03448
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X2
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mde
Musca domestica (house fly)
Pathway
mde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101900513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101900513
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101900513
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101900513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_1st
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
101900513
NCBI-ProteinID:
XP_005189232
UniProt:
A0A1I8N450
LinkDB
All DBs
Position
Unknown
AA seq
2543 aa
AA seq
DB search
MNLDHLKLTLTQIGNLVKHLNKKNFAETTENLNKLIEEFGLEADRHCLRCLFASISFNDP
ALTSTNSPSTSSLSNVQQQQLLLAKLLQIQLELQLNKAAHISNICFAIDNCWIQQKSLNK
STFPAHFISQLVRITGINKLCECVVSLSLTHSSHSDLRICARDQLRKALPELIESYLGKN
QQSAAVISSLHDASLDLIQLLLTCLDVYVADKNLRQQFLQKLREEFPRERVPLILAPYLY
VAPTSSFDLETSSGDELVVSSSRTNPTIDHTNGSVSEVPIEEIYDNLCENIFSQHAYNNI
MDTSWINLILEIGYEFTSSVEECKNHLRSGGSTANNAAAGAGTGAAGNASNNASGGGASG
QPRDLQPQDVAKIIGLMCRRHTSLLDCNVNLPTAANFWPQQPGAQNNPQQQQQNASNNNN
DNSTGNTDKSNNGNDKKDKPTVGSNSAGGTGSTDTTQAWKPDVFVQALKEVVPQLNWKEV
GLELDHPEFIIKDRIGLDLLLTIFRLATQSNLFPHPDCIYRHWQNVEGQFSLIAVMLKNP
DLFSFADHIYTPAPVEMLKTPPDNDNKEVCAWKSLHLVEVLLYIAEHGLYAQVHELLKFP
AQHCPDVLFLSLLHINPPLTALRQELFNQLIPTFLANHPNSGVILASAWNSNNFGMTLRP
LIMHAMSEWYLRGTEYDQVKLSRILDVAQDLKALSTLLNARSFLFVIDLACLASRREYLK
LEKWLSDKIREHGEPFIQAMLKCLQRRCPQITNAKIPDDQLPPKQAQLPPETVNTMLSCL
QACIGNVPHEIAELIMQMSANCSIMANKARAAAAAAVQQGPLVPNQSALRGHRGLDMGAA
GVGGVGGVPGGVPPPFSANLNAQQMFGPTMDTLSNLTTNIAGLNLGGPNGAFNFGNVLNN
LVSTPASPSRLMNPAAASPYPMNPMQMPAPPPTVGGIGRMPPAAPQPTPTPPNPNNAIMP
DFQGPVSKEIEDEANSYFQRIYNHPPHPTLSIDEVLDILQRFKESNNRREQEVYQCMLRN
LFEEYRFFDHYPEKELQITAQLFGGIIERNLVPTFVALGLALRCVLDALRKREGSKLYYF
GITALDRFKTRLHTYNKYCEYIRSIPHFKDFPPHLIQYVEYGYLGQEPPAKPMLMGAGAA
GQQPPDSIYRSNSVTGNIVTTPTQQKPMVVAHTARMKSIATATNIDTLLVANQEEKITVP
PEAIQDKTAFIFNNLSQLNIPQKVEEIKDIMTKEYWPWMSQYLVLKRASMEFNFHTLYFN
FLEALMNPEINKYVTKETIRNIKVLLRSDKGVVNFSDRSLLKNLGHWLGMMTLARNRPIL
QIDLDLKSLLAEAYHKGQQELLYVVPFVAKILESSAKSKVFKSPNPWTMAIMNVLGELHQ
EPDLKLNLKFEIEVLCKSLNIDLNKLKPVIYLKDPARYAMIESQMAQPKPKAIEAGPSQQ
QQQQQQQQPPQPQQPTPTPPHQHPMMSEADAQAMMMANSGGPGGVVPGGSIPSPSIPQDQ
VGSMMMPAPEPRFSYVDINVTNFQLIAQHVVLSPNVAFIHVNPTVKHMVLNAIERTITEW
LQPVVDRCVRIAASTTEQIVRKDFALDPEEHRMRTAAHQMVRNLAAGMAMITCKDQITQT
LNNNLRKAFMSALQGPPSFQEIEGASIQLTNDNVELACAFIQKTAAEKATPEVDRRLAAD
FETRKMAREENSRYFDAQTLAYQSERLPEQVRLKVGGVPPNQFAVYAEFARNIPGFQIMS
DRDIALFLPKPQEMPPTFPTDEMGLMYAELASKMEAFLNSCVSNNNLQLQAGKMHALLNA
LMVTRRIRDNDSALNLLTRCVEGFVEGLINIPEHVEQMKLYRDIHLRILTLLQNTFGAPA
TERAITKCIFDIREEARYNVEAIKLLITSHFINVPQFDMLLRESMDNGNNFLAVTFAITL
MERLLTDERSTSIIAETELLVTIEMLSRLTQHRHRYPEALSHMIDMLFGSSNTMDAGTFG
AVTDRYLAGATQYIHSGMQHVRSNDCDDPPGLQEKTEFLLKDWVSIYSQSHNLSRETKNF
GSFVQKMNMYGILKTDDLITRFFRQATQFCMDLVYRILNDPTHTPVQAKTKIFHWIDAFV
HLIALLVRHSGETGNHTTKINLLNKVLGIVLGILLQDQEVHCSSFQQLGYHRFFVMLFLE
LSSPDAVLESLMHSIVTAFSHTYHLLNPALAPGFCYAWLELISHRIFIGRILAQIPQQKG
WPLYAQLLLDLFKYLAPFLRNAELAKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDA
IPPNCIQMRNIILAAFPRNMRLPDPFTPNLKVDMLAETATAPKICSNYVMNIQPANFKKD
LDSYLKARAPVTFLSELRSHLQISNEPGSRYNIPLMNALVLYVGTQAIAHIRNKNLIPNT
SNVAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEA
IQEQITRVLLERVIVSRPHPWGLLITFIELIKNPIYKFWEHDFVHCAPEISKLFESVARS
CMVKSNHPQQMNNMVDGEIQEIN
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagaccatctgaaattgacgctgacgcagattggtaatttggtcaaacattta
aataagaaaaattttgctgaaacaactgagaatctaaataagttaattgaggaatttggc
ttagaagcggatcgtcattgtctgcgttgtctatttgcgagcatcagttttaatgaccca
gcattaacgtcaaccaactcaccatcaacgtcatcattatcgaacgttcaacaacaacag
cttttactagcgaaacttttacaaatccaattggaactacagctgaacaaggcagcgcat
atatcgaatatttgctttgccattgataattgttggatccagcaaaagagtcttaacaaa
tccacatttcctgcacattttataagtcaacttgttcgaataactggcataaataaattg
tgtgaatgtgttgttagtctatcgctgacccactcatcacattcagatttgcggatttgt
gctcgtgaccaactgcgaaaagccttgcctgaacttatcgaatcgtatttgggaaagaac
caacaatcggctgctgttataagtagtttgcatgacgcgtccttggacctaatacaactt
ttgctgacctgcttggatgtatatgtggccgataaaaatttgcgtcaacaattcttacag
aaactaagggaggaatttccccgagaacgtgtaccactcattctagctccatatttgtat
gtcgctcccacatcctcttttgatttggaaacatcaagcggtgatgaattggtagtgtca
tcatcacgaacgaatccaacaatcgaccacaccaatggatccgtatcggaagtacccata
gaagagatctatgataatttgtgcgaaaacatattttcccaacacgcctacaataatatt
atggacacatcttggattaatttaatccttgaaatcggttatgagttcacttcaagtgtt
gaagaatgtaaaaatcatctacgcagtggtgggtcaacggccaataatgccgctgctggt
gctggaacgggggctgctggtaatgccagcaataatgcctccggcggtggagcatcaggc
caaccgcgggatttgcagcctcaagatgtggccaaaatcataggtcttatgtgccgtcgt
cacacctctttgctggattgcaatgtaaatttaccaacggcagccaatttttggcctcag
cagccgggtgcccaaaacaatccccaacaacaacagcagaatgccagcaataacaacaat
gacaactcaaccggtaacacggataaaagcaataatggcaacgacaaaaaggataaacct
acggttggcagtaactcggctggaggtacaggcagcacggacacaacacaggcctggaaa
ccagatgtatttgtgcaggccctcaaagaagtagtacctcaattgaattggaaggaagtc
ggcctggaacttgatcatcccgaattcataataaaagatcgcattggtcttgatctgctg
ttgaccatattccgtttggccacacagtcaaatctatttccccatccagattgcatttat
cgtcattggcaaaatgtcgaaggacagttttctctcattgctgtgatgctaaagaatccc
gatctcttttcgtttgccgatcatatatacacacccgctcccgttgagatgttgaagaca
cctcccgataatgacaacaaggaagtgtgtgcatggaaatctctgcatttggttgaagtg
ttgttgtacatagctgaacatggtttatatgctcaagttcatgaattattgaaatttcca
gcccaacattgtccagatgtattattcctttcattgctgcacataaatcctcccctcaca
gccctgcggcaggaactattcaatcaactaatccctacatttttggccaatcatccaaat
tctggtgtgattttggccagtgcatggaattctaataattttggcatgacgctacgtcca
ctcattatgcatgccatgtcggagtggtatttgcgcggcacagaatacgatcaagtgaaa
ttgtcaaggattttagacgtggcccaggatctgaaggctttgtcgacactgctgaatgcc
cgctcctttttgtttgtcatcgatttggcatgtttggcttctcgccgtgaatatttgaaa
ctggagaaatggttaagtgataagattcgtgagcatggtgagcccttcatacaagctatg
ctgaaatgcttgcaaagacgttgtcctcaaataacaaatgcaaagattcctgatgaccaa
ttacctcccaaacaagcccaactgccacccgagactgtgaacaccatgctgtcttgcctg
caggcctgtattggcaatgtaccccacgaaatagctgagctgataatgcaaatgtctgca
aactgttccattatggccaacaaggctcgagctgctgcagcagcggctgtgcagcaaggt
cccttggtacccaatcagagtgcactacgtgggcaccggggtttggatatgggtgccgcc
ggtgtaggtggagttggcggagttcccggcggtgttccaccacctttttctgccaattta
aatgctcaacaaatgtttggacccacaatggatactctgtcgaatctgactacaaatata
gctggcctaaatttaggtggtcccaatggagccttcaactttggcaatgttctgaacaat
ttagtttcaacaccagcatcaccatctcgccttatgaatccagccgctgccagtccatat
ccaatgaatcccatgcaaatgcctgcaccaccacccactgtcggtggaattggcagaatg
ccaccagcagcgccacagcccactccaacaccgccaaatcctaacaatgctataatgcca
gatttccaaggacctgtttccaaggaaatcgaagatgaagccaactcatatttccagcgt
atttacaaccatccaccgcatcccacactatccatagatgaagtactcgatatcctacag
cgtttcaaggaatccaataatcggcgggaacaagaagtctaccaatgtatgctgcgcaat
ctctttgaagagtatcgtttctttgaccactacccagaaaaggaattgcaaataactgcc
cagttatttggtggaataattgaacgtaatttggttcccacttttgtggcattgggtttg
gctttgcgttgtgtactagacgctctgcggaaacgcgaaggttcaaagctatactacttt
ggtataacggcattagatcgctttaagacccgactacatacctacaacaaatattgtgaa
tatatacgttcgattccacactttaaagacttccctccacatttgatacaatatgtggag
tatggatatttgggtcaggagcctccagctaagcccatgttgatgggagctggagcagct
ggtcaacaacctccagattcaatttatcgtagtaactcagtaacagggaacattgttacc
acacccactcaacagaaaccaatggttgtggcacatacggcccgcatgaaatccattgcc
actgccacaaatatcgatactctgttggtggccaatcaggaggaaaagatcacagtaccg
cccgaggccattcaagataagactgccttcattttcaataatctaagtcagctaaatatt
ccgcagaaggttgaggagatcaaagatataatgaccaaggaatactggccctggatgtcg
caatatttggtgctcaagagagcttccatggaatttaatttccacacactttactttaat
ttcctggaggcattgatgaatccggagatcaataaatacgtgaccaaagaaactatacga
aacatcaaggtcttgctacgctctgacaaaggtgtggtcaatttttctgaccgcagtctg
cttaaaaatcttggtcactggttgggtatgatgactctggcacgtaacagacccatttta
caaattgacttggacttaaagtcactccttgccgaagcctatcacaagggccaacaagag
ttactgtacgttgtgccgtttgtggccaaaatcttagaatcttctgcaaagtcgaaggtc
ttcaaatcgcccaatccttggactatggcaattatgaatgttttgggtgaattgcatcag
gaacctgacttgaagttaaatttgaaattcgaaatagaagtgttgtgtaaaagtctcaac
attgacttgaataaactcaagccagtcatatatttgaaagacccagcccgctatgccatg
attgagagtcaaatggcccagccaaagccaaaagccatagaggcaggtccctctcagcaa
caacaacagcagcagcaacagcagccaccacagccgcagcaaccaacccccactccacct
caccaacatcccatgatgtcagaggccgatgctcaagctatgatgatggccaattcaggt
ggacccggaggagtggttccaggtggcagcataccatcgcccagcattcctcaagatcaa
gtcggttccatgatgatgcccgccccagagccacgtttctcctacgtagacatcaatgta
actaacttccagttgattgcccagcatgtggttctatcaccaaacgttgcttttattcat
gtcaaccccaccgtcaagcacatggttttaaatgccattgagagaaccattaccgaatgg
ctacaaccggttgttgatcgttgtgtgcgcattgccgcctccaccacagagcaaattgtg
cgcaaagattttgctctcgatcccgaagagcatcgtatgcgcactgctgcccatcaaatg
gtacgtaatttagccgctggcatggctatgattacctgcaaggatcagataacgcaaacc
ctcaacaataacctgcgtaaagcctttatgtccgcgttgcaaggaccaccttcattccaa
gaaatcgaaggagcctccatacagctaaccaatgacaatgttgaattggcatgtgctttc
atacagaagacagctgcagaaaaggcaaccccagaggttgacaggcgtttggctgctgac
tttgagacccgtaaaatggcccgagaggagaatagccgttactttgatgcacaaacgttg
gcttaccagtcggaacgtttacccgaacaggttcgcttgaaagtgggcggagtgccacca
aatcaatttgccgtgtatgccgagtttgctcgtaacatcccaggattccagataatgagc
gatcgtgatatagcattattcctacccaaaccacaggaaatgcctcccaccttcccaacc
gatgaaatgggactcatgtacgccgagctggccagcaaaatggaggcattcctcaacagc
tgtgtaagcaacaacaatctgcaactacaagctggtaaaatgcatgccctactcaatgcc
ctgatggtcaccaggcgcatacgggacaacgattcagccctcaatctgttgacacgttgc
gtcgagggcttcgttgaaggtctgatcaacatacccgaacatgtggagcaaatgaaactc
taccgcgacatacacttgcgcattctgactctgctgcaaaatacttttggagccccagca
accgaacgcgccattaccaagtgtatctttgatatacgtgaagaggcccgctacaatgtg
gaggccatcaaattgttaatcacctcacattttataaatgtgccacaattcgatatgctg
ctgcgcgagtcgatggataacggcaacaactttttagctgtcacctttgctattacgctc
atggaacgtttactcaccgatgaacgttccacgtcgattattgccgaaaccgagttattg
gttaccatcgaaatgttgagccgcttgacgcaacatcgtcaccgctaccccgaggccctg
tcacatatgatcgatatgctctttggcagcagcaacaccatggatgcaggaacatttggt
gctgtaacagaccgttacttggccggagcaacacaatacatacactcgggaatgcaacat
gtaaggtcaaatgattgtgatgatcctcccggtctgcaggagaaaacagaattcctactc
aaagattgggtatccatctattcacaatcgcacaatctgtcgcgtgaaaccaagaacttt
ggctcatttgtacagaaaatgaatatgtatggcattctgaagacagatgacctgattaca
cgattcttccgccaggcaacccagttctgtatggatttggtgtatcgcattctcaacgat
ccaacccatactcccgtgcaggcaaaaaccaaaattttccattggatagatgcttttgtg
catttgattgctttgctggtgcgtcactcgggcgagacgggcaatcacaccacaaaaatt
aacttgcttaacaaagtgttgggcattgtcttgggcattctgttgcaagatcaagaagtc
cattgcagttcattccaacagctgggatatcatcgcttctttgttatgctgttccttgag
ctgagctcacccgatgctgttttggaatctcttatgcacagtattgttacagccttttcg
catacgtatcatctcctaaatcctgcattggctccgggattctgttatgcctggttggag
ttgatctcacatcgtatcttcatcggacgtatcctggcccaaataccccagcaaaagggt
tggccactctatgcccagttactcttggacctgttcaagtatctggcaccattcctgcgg
aatgccgagctagcgaagccagtacagttgctgtataaaggaacgctgcgggttctgctt
gtcttgttgcacgatttccccgaatttttgtgtgactatcattttggcttctgtgatgcc
ataccacccaattgtatacaaatgcgtaatatcatattggcagctttcccacgtaatatg
cgtctaccggatccatttacacccaatttaaaggttgacatgttggctgagactgcaaca
gctccaaagatctgttccaattatgttatgaacattcaaccggccaatttcaaaaaggac
ttggattcatatttgaaggcccgggcaccggtaacattcctatcggaattacgtagtcat
ttgcagatatcaaatgaacctggctcacgttataatataccgcttatgaatgccctggtc
ttgtacgtgggtacccaagccattgcccacattaggaataaaaacctaatacccaataca
tcgaatgttgcacatagtgctcatatggatatcttccaaaatcttgctgttgatttggat
acagaaggccgatatctgttcttaaatgctattgccaatcagttgcgttatcccaacagt
catacgcattactttagctgtgccgtgttgcatctattcgccgaagcgaattccgaagct
atacaggagcaaattactcgagtgctgttggagcgtgttatcgttagtcgtccacatcca
tggggtctattgataacattcatcgaattgattaagaatcccatttataaattctgggaa
cacgattttgtacattgtgctccagaaatatccaaactttttgaatcagttgcacgttca
tgcatggttaaatccaatcatccccaacaaatgaacaacatggtggatggtgagatacaa
gagatcaattaa
DBGET
integrated database retrieval system
