Musca domestica (house fly): 131802143
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Entry
131802143 CDS
T03448
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
mde
Musca domestica (house fly)
Pathway
mde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131802143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
131802143
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131802143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131802143
NCBI-ProteinID:
XP_058977588
UniProt:
A0ABM3UVP6
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MKETPLSTCEKNFIIQAIKQNQRLDGRKNDEFRNIKINYGAEWGSVLVALGETKVLAQVS
SELGEPKATRPNEGIFHINVELGPMAAPHFEAGRNCELTVQLNRTLERTFKDSKCLDLES
LCITAEERVWILRVDLNVLNHEGNLIDCCSIATLCALMHFRRPEVSIVEDDVIIHTAAEK
EPQPMVMHHYPVCVSYCTFDDGSIAVADPTVMEERTSESQMIFGINSFRELCCLNLGGSS
LTSSALLLQCSKRAAKHAKYVVELVKKTLENDLSAREDRSNVGFTECLKQNSITSLAEDR
LVLKLRHFTFEDGDKKSMIEEEKFNEKDIENEEKEVATNIDPKNDLQTTTNDKWSVEEQD
DSNMESEEVESSQEDCTKNNKGVRPKNDQRGNLKSQSDSEEDEKITI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagactcccctttccacgtgcgaaaagaattttataattcaagcaattaaacaa
aatcagcgtttagatggtaggaagaacgatgagtttcgaaatattaaaataaactacggt
gccgagtggggaagtgtactggttgcgttgggtgagaccaaagtacttgcacaagtgtct
agcgaacttggtgaacccaaagccacacgtcccaatgagggcatcttccatataaacgtc
gaattgggtcccatggctgccccacattttgaggctggtcgtaattgcgaattaactgta
cagcttaacagaaccttggagagaacattcaaggactcaaagtgcctcgacttggaatct
ttgtgtataactgccgaagaacgcgtctggattttacgggtagatttgaacgtacttaat
catgagggaaatttaattgactgttgctctattgccactctttgtgctctaatgcatttt
agaagaccagaagtcagtatagttgaagacgatgtaattatacacactgcggccgagaag
gaaccgcaacctatggttatgcatcattatccagtttgcgttagttactgcacattcgac
gatggctcgatagctgtggcagatcctaccgttatggaggaacgcactagtgaatcacaa
atgatatttggaattaactccttcagagaactatgctgtctaaatttgggtggttcctcg
ttgaccagctcagcgttgttactgcaatgctcaaaaagagcggcaaaacatgcaaagtat
gttgtagaactggtgaaaaagacactagaaaacgatttgtcagctagagaggatcgctca
aatgtaggttttacagaatgccttaaacaaaattccataaccagtctggctgaagatcga
ttggttttaaaattgagacactttacattcgaagatggggataaaaaatcaatgatagag
gaagaaaaatttaatgagaaggacattgaaaatgaagaaaaagaagttgctacaaatata
gatcccaaaaacgaccttcagactacaacaaacgacaaatggtccgtagaagaacaagac
gattctaatatggaaagtgaagaagtcgagtcatcacaagaagattgtacgaaaaataat
aagggtgttcgaccaaaaaatgaccaaaggggaaatctaaaatcacaaagcgattcagag
gaggatgaaaaaattactatatga
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