Musca domestica (house fly): 131803434
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Entry
131803434 CDS
T03448
Name
(RefSeq) probable ATP-dependent RNA helicase spindle-E isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mde
Musca domestica (house fly)
Pathway
mde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131803434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
131803434
03012 Translation factors [BR:
mde03012
]
131803434
Enzymes [BR:
mde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131803434
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131803434
Translation factors [BR:
mde03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131803434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4780
G-alpha
nSTAND3
DEAD
AAA_14
SRP54
Motif
Other DBs
NCBI-GeneID:
131803434
NCBI-ProteinID:
XP_058980710
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MNRNPYPDFMAPPSCSYSNQRYFEGNRSERATSVCSSSLEVMDEGYLNNWILKSELLEKN
KCEEFQEIFELRRRLPVIQHCREILKAIRRHQVVLLVGGQSCGKTTQIPQMVLDDFIFNN
CGSECRIACVQTERPNASSAAEHVAYERLESLGNSIGLQVAGEINMPRETGYILYCTAQI
LIGRFKNDPLLKTFTCVILDDIQDQCPEYNQLMDNLRNILPFRPDLKIILMSNTASEDTF
CDYFQEYHVFFVHAMPQSSMSKASSLSTIYDDAIQQNINNDDAITISDSASSVVTNVVRV
QQDNYRKSIAILSKYDGKDISQLSKREKKLINKHRKRVELFEKVHPSARAEIIPDYAFPT
GASFAAKIKHRRLSSICPSSELQVAIVDRSNPQGRISDEKWYNLEEMLIREMTSNKWTER
GISFEGANWSRGIKIIKCGNSQSLQFLKTNIANVCQNWPYNHLEIIPYSNLPPRIFARMW
IPPPVPPTSAILTLIEKQNKGIETSNWKILSCKPSRRNLGTDYRMFIDANSSKKLQESQG
RIKYGLNFIRIVVANKL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtaatccatatccggactttatggcaccgccatcttgttcgtattcaaatcaa
agatattttgagggcaatcgcagtgaacgcgctacaagtgtttgttcctcatcgttagag
gtgatggacgaaggctatttaaacaattggatcttaaaatcggaactcctggaaaagaat
aaatgcgaagaatttcaagaaattttcgaattacgtcgtcgcttgccagttatccagcat
tgccgggagattttaaaagccatacggcgtcatcaagtcgtgctgttagttggcgggcaa
tcgtgtggcaaaaccacccaaataccccaaatggtattggatgattttattttcaataat
tgtggcagtgaatgtcgaattgcttgtgttcaaacggaaaggccaaatgcctcatcagcg
gcagagcatgtagcctacgaacggctggaatcattgggaaattcaattggtttacaagtt
gctggtgaaatcaacatgccacgggaaacaggttacattttatactgtactgcacaaatc
ttaattggaagattcaaaaacgatccgttattgaaaactttcacatgcgttatattggac
gatatacaagatcagtgtccggagtataatcaattaatggataatttgagaaatatttta
ccctttcggccggacttgaaaatcatactaatgagtaacacagcttcagaagacacattt
tgtgattattttcaggagtatcatgtcttctttgtacatgcaatgccacagtcgtcgatg
tccaaagcatcaagtttatcaacaatatacgacgatgccattcaacaaaatattaacaat
gatgatgctataacaatttctgatagcgcatcgtctgttgtaacaaatgtagtacgcgtt
cagcaggataactataggaaatccatagcaattctaagtaaatatgatggcaaagatatt
agtcaattatcgaaaagggaaaagaaactaataaacaaacatagaaaaagagtggaattg
tttgaaaaagtgcatcccagtgctcgagcagagataataccagattatgcatttcccaca
ggtgcatcgtttgccgcaaaaattaaacacagaagactcagcagtatttgtcccagttca
gagttacaggttgcaatagttgatagatctaatcctcagggaagaatcagcgatgaaaaa
tggtataatctcgaggaaatgttaataagagaaatgacctccaataaatggactgaacgg
ggtatatcatttgagggtgcaaactggtctagaggaataaaaattattaaatgcggcaac
agtcaatcgctgcaattcttaaaaacaaacattgcaaatgtctgtcaaaattggccctat
aaccatttagaaattataccttattccaacttgccaccgcgcatttttgccagaatgtgg
attccaccaccggtgccaccaacgtctgccattctcacgttaattgaaaaacaaaacaaa
ggcattgaaacctcaaattggaaaatcctcagttgtaaaccatcgagaaggaatctcggc
actgactatcgtatgtttatcgatgccaactcatcgaaaaaattacaagagagccaaggt
cgcataaaatatggtcttaactttattaggattgtagtagcaaataagctttaa
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