Musca domestica (house fly): 131805415
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Entry
131805415 CDS
T03448
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex exonuclease RRP44-like
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mde
Musca domestica (house fly)
Pathway
mde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131805415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
131805415
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
131805415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
131805415
NCBI-ProteinID:
XP_058984532
UniProt:
A0ABM3VFG2
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MQTIREFTRKTKRGNILKIVREHYLRIDLGCGSDICHRCQQDEDGVQLMSDRMNRSTLFD
FPHYVVLDTNVVLHQIDVLEEDALRNVIVLSTVLQEVKHCSSVIYKRFHEVVQHKPRGFF
VFVNEHHKDTYVERQPGESANDRNDRAIRFATSWYDGHILDVQQSAVKKSKGKQLTRVVL
ITDDIANKEKAEKEGILAATAEEYIKSLVDYPMLIDKYARKDIEXDRETDPLFPMHLSMN
EIIEGVRNQRLLQGAFQASRENYLEGSVNVEGYENPILIQGRDSLNRAVDGDLVAIELLP
ESKWSAPSEIVLEEADTIDVGEGETDEEPAEDVLADAALKASASGEKRPTAKVVGIIRRK
RRQYCGILQPAQLPGGTKHIFIPADRKIPRVRIETRQADKLQNQRIIVAIDTWPRSSRYP
HGHFVRALGALGDVETENEVILLEHDVPHSKFSEEVLSFLPQMPWTITPEDYAARVDLRD
LDICSVDPPGCTDIDDALHCRDLPNGNLEVGVHIADVSHFIRPGNALDKEAASRGTTVYL
VGKRIDMVPDLLSSNLCSLRGGVERFAFSCIWEMDHEANVISKKFHKSVIKSKSAMTYEM
AQIIIDDKTQNHNIAKSLRNLNKLAKILKKRRMDNGALVLASPEIRFQVDSETHEPLEVE
AKQLRDTNSMVEEFMLLANVTVAEHIAQEFPECAMLRRHPRPPLSNFEPLIKAARHQNFE
ICCDSGLEFSKSLDTCVKPDNPYFNTMIRILATRCMMQALYFISGTLQKDQFEHYGLAAP
IYTHFTSPIRRYSDIIVHRLLAASIGADSTYAALLDKNANAELCHNLNYRHKMAQYAGRA
SVALNTHLFFKGKVQDEEGYILFVRKNALQILIPKFGLEGTIYLNALKDDQKKTNNGVVF
TFNEEDYTQRCGDIIFHAFDPVTVRLSLDSSNIQHEKLVFQLVKPYIKGFSIEIDENAAG
GGAAASTAAIKSNDVEMTPIAPPQKKIKKSKQNKNNK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgcagactatacgcgaatttactagaaaaaccaaaagagggaacatccttaagattgta
cgtgaacattatttgcgcatagatttgggctgtggctccgatatatgccatcgctgccag
caagatgaagatggtgtacagctaatgagtgaccgcatgaaccggagcaccttgttcgac
ttcccgcattatgtggtattggatacgaatgttgtgctgcatcaaatcgatgttctggag
gaagatgctttgcgcaacgttattgtactatccacggtgctgcaagaggtgaaacactgc
agttcggttatatacaaacgattccacgaagttgtccagcacaagccacgtggtttcttt
gtctttgtcaatgaacatcacaaggatacctatgtagagagacagcccggcgaatcggcc
aatgatcgtaatgatcgggctatacgttttgccacatcctggtatgatggccacatcttg
gatgtgcaacagtcggctgtcaagaaatcgaaaggaaaacaattgacaagagttgttttg
attaccgatgacattgccaataaagagaaagccgaaaaggaaggcatattagcggccact
gcagaggagtacattaaatccttggtcgattatcccatgctaattgacaaatatgcccgc
aaggacattgaanaagatcgcgaaacagatcctctgtttcccatgcatttgagtatgaat
gagataattgaaggtgtgaggaatcaacgtctcttgcagggagcatttcaggcatcaagg
gaaaactatttagagggttcggttaatgtggaaggatatgagaatcctattctcattcaa
ggccgtgattcattgaatcgtgctgtggatggtgatttagtggccattgaacttttgccc
gaatccaaatggtcggcccctagtgaaattgttctcgaggaagccgacaccattgatgtg
ggtgaaggtgagacggacgaggagccggctgaagatgttttggcagatgctgcattgaaa
gcctccgccagcggagaaaaaagacccacagccaaggttgtgggcataataagacgtaaa
cgccgtcaatattgtggtattttacaaccagcccaattaccgggtggtacaaaacatatt
tttataccagccgatcgtaaaataccacgagtacgcattgaaacaagacaagctgataag
ttacaaaatcaacgtatcattgtggccattgacacatggccacgatcatcgcgttatccc
catggacattttgttagggctttaggtgccctgggagatgttgagacagaaaatgaggtt
attcttttggaacatgatgtgccgcatagcaaattttccgaagaggtgcttagctttttg
ccccaaatgccttggacaattacaccggaggactacgccgcccgtgttgatctccgggat
ttggatatatgctctgtcgatcctccaggctgtacagatattgatgatgctttgcactgt
cgtgatttaccaaatggcaatttggaagttggtgtccatattgccgatgtcagtcacttc
atacgtcccggcaatgccttggacaaggaggcagccagccgtggcaccaccgtctatttg
gtgggcaaacgtattgacatggtaccagatttgttgagttcaaatctatgttcattgaga
ggcggtgtggaacgttttgccttctcatgtatttgggaaatggatcatgaggccaatgtt
atcagcaagaaattccataaatctgttataaaatccaaatctgcaatgacctatgaaatg
gctcaaattatcatagacgataagacacagaatcacaacattgccaaatctctgcgtaat
ttgaataaattggccaagattttgaagaaacgtagaatggataatggagcattggttttg
gcctcacctgaaatccgtttccaggtcgacagcgaaacccatgagccactggaagttgag
gcaaaacagctgcgtgacaccaattcgatggtagaagaattcatgttattggccaatgta
acggtggccgaacacattgcccaggaattcccagaatgtgccatgttgcgtagacatccc
cggccaccgctaagcaatttcgagcccttaattaaggctgcgcgtcatcaaaactttgaa
atttgttgtgactctggtttggaattttccaaatcgttggatacctgtgttaagcccgat
aatccctacttcaataccatgatacgtattttggcaacaaggtgtatgatgcaggccttg
tattttattagtggtaccctgcaaaaggatcaatttgaacattatggtttggcggcaccg
atttatacgcatttcacatcgcccattagaagatattccgatataattgtccatcgtttg
ttggccgcttccataggggcagacagtacctatgctgcattgctggacaaaaatgccaat
gctgaattgtgtcacaatctaaattatcgccataaaatggcccaatatgccggcagagcc
tcagtggccctaaacacccatttattctttaagggaaaggttcaggatgaagaaggttac
attttatttgtacgcaaaaatgccctgcaaattcttatacccaaattcggtttggagggt
acaatttatttgaatgccctaaaggatgatcaaaagaaaacgaataatggcgttgtattt
acattcaatgaagaggattatacccaacgttgtggtgacattatcttccatgcctttgat
ccggtcacggtacgcctgagcttggactccagtaatattcaacatgaaaaattagttttc
caattggttaaaccttatataaaaggttttagcattgaaattgatgagaatgctgctggt
ggtggtgctgctgctagcactgctgcaataaaatcgaacgatgttgaaatgaccccaata
gctccaccacaaaagaaaattaaaaaatccaaacaaaataaaaataataaataa
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