Mycolicibacterium diernhoferi: K0O62_00600
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Entry
K0O62_00600 CDS
T07506
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mdf
Mycolicibacterium diernhoferi
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdf03032
]
K0O62_00600
03400 DNA repair and recombination proteins [BR:
mdf03400
]
K0O62_00600
Enzymes [BR:
mdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0O62_00600
DNA replication proteins [BR:
mdf03032
]
Prokaryotic type
DNA Topoisomerases
K0O62_00600
DNA repair and recombination proteins [BR:
mdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0O62_00600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QYL22915
LinkDB
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Position
complement(130142..132289)
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AA seq
715 aa
AA seq
DB search
MTATLDVPEQNPDLVLDQSADDYWNQYQLTFALYSVSDRAIPSAYDGLKPGQRRLLYQMH
DSKLLPGNKPQKSSKVCSAVTGNLHPHGGASMYGAAALMAAEFQRVKVIDGQGAFPRIQG
DIPAADRYTEMRLSAPGAALTAELDSHAVPMVPTFDGEWTEPTWLPAQWPVLLCNGAMGI
AEGWATKVPAHNPREIMAACRALLKTPNMTDDRLVKLIPGPDWGCGARVIGESGLREYIT
TGRGQFTVRGTVTVEGKNCIVTELPPGVASNTVQERIRALVESGEMSGVADMSDLTDRRN
GLRIVVTAKRGHSAEQIRDQLLALTPLESTFAASLVALDENRVPRWWSVRELIVAFLHLR
DSVVLRRSEYRLEKVAARRHLVAGLMLIHLDIDTAVAIIRSSDTVDDARRGLQERFKIDA
EQADYVLSLQLRRLTRLDVIELQAEAEKLDAEYAELTELVTNPDARRVVIDKELVETAKL
FKGPEYDRRTVLDFEATPVTAGAGEDGARERKVNAAWRLDDRGVFSDSHGELLSSGLGWA
VWTDGRIKFTTGGGLPYKIRDIPVAPDITGLLRSGMLPEGYHLALVTRRGKILRIDPAAV
NPQGVAGNGVAGVKLASGGDQNDEVIAALPISCANGEAILSLSEKSWKVTDVADIPVKGR
GGAGVGFHPFVKGEDVLLAATVSATGYVRGKRAVRAENRAKASIKGSGVDVTPAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccaccctggacgttcccgagcagaaccccgacttggtgctcgaccagagcgcc
gacgactactggaaccaataccagctgacgtttgcgctgtacagcgtcagcgaccgcgcc
atcccgtcggcctacgacgggctcaagcccggtcagcgccggctgctgtaccagatgcac
gactcgaagctgctgcccggcaacaagccgcagaagtcctcgaaggtgtgctccgcggtc
accggcaacctgcatccgcacggcggcgcgtcgatgtacggcgcggcggcgttgatggcc
gccgagttccagcgcgtgaaagtcattgacggacagggcgctttcccgcggatccagggc
gacatcccggccgccgaccgctacaccgagatgcgactgtccgctcccggcgcggcgctg
accgccgaactcgacagccacgcggtgccgatggtgccgacgttcgacggtgagtggacc
gagccgacctggctgccggcgcagtggccggtgctgctgtgcaacggcgcgatgggtatc
gccgagggctgggccaccaaggtgcccgcccacaacccgcgcgagatcatggcggcctgc
cgcgccctgctgaagaccccgaacatgaccgacgaccgcctggtcaagctcatcccgggc
ccggactggggctgcggggcccgggtcatcggcgagagcggcctgcgcgagtacatcacc
accgggcgcggccagttcaccgtgcgcggcacggtgaccgtcgaaggcaagaactgcatc
gtcaccgagcttccgcccggcgtggccagtaacactgtgcaggaacggatccgggccctg
gtggagtccggggagatgtccggcgtggccgacatgtcggacctgaccgatcgccgcaac
gggctacggatcgtggtcaccgccaagcgcggccacagcgccgagcagatccgcgaccaa
ctgctggcgctgaccccgctggagtcgacgttcgcggcctccctggtcgccctggacgag
aaccgggtgccgcgctggtggtcggtccgcgagttgatcgtcgcgttcctgcacctgcgg
gattcggtggtgttgcgccgcagcgagtaccggttggagaaggtcgccgcgcgccggcac
ctggtggccggcctgatgctgatccatcttgacattgatactgccgtcgcgatcattcga
tcgtccgacaccgtggacgacgcccgccggggcctgcaggagcggttcaagatcgatgcc
gagcaggccgattacgtgctgagcctgcagttgcgccgcctgacccgcctcgacgtgatc
gagttgcaggccgaggccgagaagctggacgccgagtatgccgagctgaccgaactggtg
accaaccccgatgcgcgccgggtggtgatcgacaaggagctcgtggagaccgcgaaactg
ttcaagggacccgagtacgaccggcgcaccgtgctggacttcgaggcgaccccggtgacg
gccggggccggcgaggatggggcgcgtgagcgaaaggtcaacgccgcctggcgtcttgat
gaccggggggtgttctccgacagccacggcgagctgctcagctcgggcctgggttgggcg
gtgtggaccgacggccggatcaagttcaccaccggcggtggtctgccgtacaagatccgc
gacatcccggtcgccccggacatcaccgggctgctgcgttccgggatgctgcccgagggc
tatcacctggccctggtcacccggcgcggcaagatcctgcgcatcgacccggccgcggtg
aacccgcagggtgtggccggcaacggcgtggccggagtgaagcttgcgagcggcggtgac
cagaacgatgaagtgattgccgcgctgccgatttcgtgcgccaacggcgaggcgatcctg
tcgctgtcggagaagagttggaaggtcaccgacgtcgccgacatcccggtcaagggccgc
ggcggcgccggcgtcgggttccacccgttcgtcaagggcgaggatgtcctgctggcggcg
acggtctccgcgaccggatacgtgcgcggcaagagggcggtgcgcgcggagaaccgggcg
aaggcctcgatcaaagggtccggtgtggatgtgaccccggcggagtag
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