Mycolicibacterium diernhoferi: K0O62_04140
Help
Entry
K0O62_04140 CDS
T07506
Symbol
ramB
Name
(GenBank) acetate metabolism transcriptional regulator RamB
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
mdf
Mycolicibacterium diernhoferi
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdf03000
]
K0O62_04140 (ramB)
Transcription factors [BR:
mdf03000
]
Prokaryotic type
Helix-turn-helix
XRE family
K0O62_04140 (ramB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_19
HTH_31
HTH_25
HTH_26
HTH_37
Sigma70_r4
HVO_2718
DUF5979
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QYL23530
LinkDB
All DBs
Position
complement(879259..880710)
Genome browser
AA seq
483 aa
AA seq
DB search
MSKTYVGSRVRQLRRERGFSQAALAQMLDISPSYLNQIEHDVRPLTVAVLLRITEVFGVD
ATFFASQDDTRLVAELREVTLDRDLDIAVDPAELADIVSAHPEFARAMVSLHQRYRLTTT
QLAAATEGRYTSGSGGSGTGTITMPHEEVRDYFYQRQNYLDELDTAAEDLTIRMRMHRAE
LTRELSDRLTRVHGVRIVRRNDLDDSVLHRFDPATRTLEIGEHLSGGQYVFKLAAELGYL
EFGDLIDKLVDEGKFTSDESRTLARLGLANYVAAALVLPYRQFHETAENFRYDVERLSAF
YSVSYETIAHRLSTLQRPSMRGVPLSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVY
ETFAYPGKILVQIAQMPDGRDYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYS
EGLDLSGGAGATTSNPMATPIGAGCRVCERDNCPQRAFPALGKALDLDAHRSTVSPYLVR
QTT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaagacctacgtcggatcacgggtgcgccaactgcgccgcgagcgcggcttcagt
caggcggcgctggcgcagatgctcgacatctccccgagctacctcaatcagatcgaacac
gatgtccgtccgctgaccgtcgccgtcctgctgcgcatcaccgaggtgttcggggtcgac
gccaccttcttcgcctcccaggacgacacccggctggtggccgaactgcgtgaggtgacc
ctcgaccgcgacctcgacatcgccgtcgacccggccgaactcgccgatatcgtcagcgcc
cacccggaattcgcgcgggccatggtgagcctgcatcagcgctaccggctcaccaccacc
cagctcgccgcggccaccgaggggcggtacacctcgggcagcgggggtagcgggacgggc
accatcacgatgccgcacgaagaggtgcgcgactacttctaccagcggcagaactatctg
gacgagctcgacaccgccgccgaggatctcaccatccggatgcggatgcaccgcgccgag
ctgacccgggaactgtccgaccggctgacccgggtgcacggcgtgcgcatcgtgcggcgc
aacgatctcgacgattcggtgctgcaccggttcgaccccgcaacccgcacgctggagatc
ggcgaacacctgtccggcggacagtacgtgttcaagctggccgccgaactgggctatctg
gagttcggcgacctgatcgacaagctggtcgacgagggcaagttcaccagcgacgagtca
cgcaccctggcccggctggggttggccaactacgtcgccgccgcgctcgtgctgccctac
cggcagttccacgagacagccgagaacttccgctacgacgtcgaacggctctcggcgttc
tactcggtgtcctacgagacgatcgcgcaccggctgtccaccctgcagcgcccgtccatg
cgcggtgtcccgctgtccttcgtccgggtggaccgggccgggaacatgtccaaacgccag
tccgccaccggtttccacttctcctcctccggcggcacctgcccgctgtggaacgtctac
gagacgttcgcctaccccggcaagatcctggtgcagatcgcccagatgcccgacggccgt
gactacatgtgggtggcgcgcaccgtggaacgacgcgcggcgcggtacggtcagcccggc
aagacattcgcgatcggcctgggctgcgaactccgccatgcgcatcggctggtctactcg
gaagggctggatctgtccggtggcgcaggtgcgacaacgtcgaacccgatggcgacaccg
atcggcgccggctgccgggtgtgcgaacgcgacaactgtccacagcgcgccttcccggcc
ctgggcaaggcgctcgacctcgatgcacaccgcagcacggtgtccccatatctggtgagg
cagacgacatga
DBGET
integrated database retrieval system
