Mycolicibacterium diernhoferi: K0O62_05225
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Entry
K0O62_05225 CDS
T07506
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mdf
Mycolicibacterium diernhoferi
Pathway
mdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0O62_05225 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdf03400
]
K0O62_05225 (recD)
Enzymes [BR:
mdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0O62_05225 (recD)
DNA repair and recombination proteins [BR:
mdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0O62_05225 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
UvrD-helicase
RecD_N
SH3_13
AAA_16
PhoH
nSTAND3
AAA_28
TraI_hel_assoc_N
T2SSE
NTPase_1
AAA_25
Herpes_Helicase
AAA_5
Mg_chelatase
AAA_29
TrwB_AAD_bind
SRP54
CbiA
NACHT
MukB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QYL23714
LinkDB
All DBs
Position
complement(1095933..1097555)
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AA seq
540 aa
AA seq
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MTIDIDFEPADIQVAQRLTALAGESSEEVALAVRLVVRALRGGSVCVDLREAAPSVGLQP
DAWLAAVAASPLAATPPVLRLFGDLLYLDRYWLEEQQVCADVLALVGTVPPGEAPDVLRL
FPDQYAEQRTAAKVALSQGLTVLTGGPGTGKTTTVARLLALLAEQAALAGRPSPRIALAA
PTGKAAARLQEAVQLQVDELDPQDRARLAGLRATTLHRLLGARPDTSSRFRHHRGNRLPH
DVIVVDETSMVSLTMMARLLEAVRPQTRLLLVGDPDQLASVEAGAVLADLVDGLGASRVA
SLTTSHRFGAAIGELAAAVRAGDADAALEVLRAGDEHIEWLPSAHSLRDVLLPQALRLRE
ACVLGDAATAAATLDEHRLLCAHRRGPFGVAHWNRQVERWLTEATGEPLWSTWYAGRPIL
VTANDYGLKLYNGDTGVTVAAPDGLRVAIGGLSFTPGRLVEVETMHAMTIHKSQGSQADE
VTVLLPPEDSRLLTRELFYTAVTRAKSRVRVVGSEAEVRAAIDRQAVRATGLGPRLRQRP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgacatcgacttcgagcccgccgatatccaggtggcccaacggttgacggcg
ttggccggggagagctccgaggaggtggcgctggccgtgcgcctggtggtgcgcgccctg
cgcggcgggtcggtgtgcgtggatctgcgcgaggcggcgccgtcggtgggactgcagccc
gatgcgtggctggcggcggtggcggcgagcccgctggccgccacgccgccggtgctgcgc
ctcttcggtgacctgctgtatctggaccgctactggctggaggaacagcaggtgtgcgcc
gatgtgctggcgctggtgggcaccgtcccacccggggaggcgcccgacgtgttgcgactg
ttccccgaccagtacgccgaacagcgcaccgcggccaaagtggcgttgtcccagggactt
accgtgctcaccggcgggccgggaaccggcaagacgacgaccgtggcgcggctgctggcg
ttgctggccgagcaggccgcgctcgcgggccgtccgtcgccgcggatcgcgctggccgca
ccgactgggaaggcggcggcgcggttgcaggaggcggtgcagttgcaggtcgacgaactc
gacccgcaggaccgcgcccggctggccggcttgcgggccaccacgctgcaccggctgctc
ggggcacgcccggacacctcgtcgcggttccggcaccatcgcggtaatcggttgccgcac
gatgtcatcgtcgtcgacgagacctcgatggtgtcgctgaccatgatggcccggctgctg
gaggctgtgcgcccgcagacccggctgctgctggtgggcgacccggatcagctggcctcg
gtggaggccggcgcggtgctggcggatctggtggacggactgggcgcctcgcgggtggcg
tcgttgacgacctcgcaccggttcggtgcggccatcggcgagctggccgccgcggtgcgc
gccggggatgcggacgcggcgctggaggtgttgcgggccggtgacgagcacatcgagtgg
ctgccgtcggcacactcgttgcgggatgtgttgctgccgcaggcacttcggctgcgggag
gcatgcgtcctcggcgatgccgccaccgcggcggcgacgctggacgagcaccggctgctg
tgcgcgcaccggcgtgggccgttcggggtggcgcactggaatcgtcaggtggagcgctgg
ctgaccgaggcgaccggtgagccgctgtggtcgacgtggtacgccggccgcccgatcctg
gtgaccgccaacgactatggcctcaagctgtacaacggggacaccggggtgacggtggcc
gcgccggacgggctgcgggtcgcgatcggtgggctgtcgttcacgccgggccgcctcgtc
gaggtggagaccatgcacgcgatgacgatccacaagtcccagggcagccaggccgacgag
gtgacagtgctgctgcccccggaggactcccggttgctgaccagggagctgttctacacc
gctgtcacccgggcgaagagccgggtgcgcgtggtgggttcagaggccgaggtgcgcgcg
gcgatcgaccggcaggcggtacgcgcaacggggctggggccgcgactgcggcagcggccc
tga
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