Mycolicibacterium diernhoferi: K0O62_05235
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Entry
K0O62_05235 CDS
T07506
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mdf
Mycolicibacterium diernhoferi
Pathway
mdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0O62_05235 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdf03400
]
K0O62_05235 (recC)
Enzymes [BR:
mdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0O62_05235 (recC)
DNA repair and recombination proteins [BR:
mdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0O62_05235 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QYL23715
LinkDB
All DBs
Position
complement(1100877..1104041)
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AA seq
1054 aa
AA seq
DB search
MALHLHRAERTDQLADGLGALLAQPSADPFATELVLVPAKGVERWLSQRLSNRLGVCANV
QFRNPRSLIAELTDTADSDPWAADAMVWPLLAVIDDSLDEPWCATLANHLGHFAAGEERE
LRQGRRYAVARRLAGLFSSYARQRPRLLLDWADLPSDLAWQRPLWDKLVQRIDAPAPHVR
HAETLARLRDSPSDLPERLSLFGHTRLPSTEIELLGALATHHDLHLWLPHPSQPLWQALQ
DINQPVPRREDTSHRVVGHPLLATLGRDLRELQRGLPAPDTDEFLPTATHPDTLLGWLQS
DIAADAIRPEGRTHHPADRSVQVHACHGPARQIDVLREVLLGLLADDPTLEPRDILVMCP
DIETYAPLITAGFGLGEVVRNAHPAHRLRVRLADRALVQTNPLLAVAAQLLALAGGRAGA
SEVLNLAAAAPVRARFSFTDDDLDAITAWVREANIRWGLDQPHRAPYGVEFLHNTWRFGV
DRVLAGVAMSEDSRAWLGTTLPLDDVSSNRVELAGRFADFVQKLTDTIHALSGTRPLSDW
LQALTAGIEALALDEEEWPAAQVQREFADIADRSDPSVLLRLSDIRALLGRHLAGRPTRA
NFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDVLARDPVTGERDIRSED
RQLLLDAIGAATQTLVITYTGANEYTGQPRPPAVPIAELLDTLAVSAAGVEELVTRHPLQ
PFDVQNVQPGALIPDAPFTFDPTVLDTARSMAGRRAPQPVFVSGPLPAPPPTDVSLADLI
AFFKNPVKGFFRALDYTLPWEVDGVSDVMPVEIDALAEWTVGDRMLGDIMRGMTPQDAQQ
AEWRRGTLPPGKLGWRRAVALRDQVALLAAEALRHRRADGQAFDVDIDLGEGRRLTGTVN
SVFTDRLVSVTYSKLGGQHLLASWIPLLALTAQRGQRFSAVCIGRPPRGTAPRTQSLDGP
NDSVGVLRDLVDMYDEGRRRPLPLPIKTSYAWAGARYVGDDPAQAATYRWRNERDDPAIT
RVWGRDPDLSELVGLDEYAQRLWVPLLHAEGVAP
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcacctgcaccgcgcggagcggacggatcagctcgccgacggtctgggcgca
ctgctcgcgcagccgtcggccgacccgttcgccaccgaactggtgctggtgccggccaag
ggggtggagcgctggctcagccagcggctgtccaaccgcctcggcgtgtgcgcgaacgtc
cagttccgcaacccacgctcgctgatcgccgaactgaccgataccgcggactcagacccc
tgggccgccgacgccatggtgtggccgctgctggcggtcatcgacgacagcctcgacgag
ccctggtgcgccaccctggccaaccacctcggccatttcgccgccggcgaggaacgcgaa
ctgcgccagggccgccgctacgccgtcgcgcgccgactggccgggttgttctcctcctac
gcacgccaacgcccacggctgctcctcgactgggccgacctgccgtccgacctggcctgg
cagcgcccgctgtgggacaagctggtgcagcgcatcgacgcaccggccccgcacgttcgg
catgccgaaacccttgcccggcttcgggactcccccagcgacctgcccgaacggctgtca
ctgttcgggcacacccggttgccgtccaccgagatcgaactcctcggcgcgctggccacc
caccacgacctgcacctgtggctgccgcaccccagccaaccgctctggcaggcccttcag
gacatcaatcaaccggtcccgcgccgggaggacaccagccaccgcgttgtcgggcacccc
ctactggccaccctgggccgcgacctgcgcgaactgcaacgcggcctgcctgcgcccgat
accgacgaattcttgcccaccgcaacccatcccgataccctgctcggctggctgcagtcc
gacatcgccgccgacgccatccgccccgagggccgcacccatcacccggccgaccgctcg
gtgcaggtgcacgcctgtcacggcccggcccgccagatcgacgtgctgcgcgaggtcctg
ctcggcctgctcgccgacgacccgaccctggagccgcgcgacatcctggtgatgtgcccg
gacatcgagacctacgcaccactgatcaccgccggtttcggcctgggcgaggtggtccgc
aatgcgcacccggcgcaccggctgcgggtccggctggccgaccgcgccctggtccagacg
aatccgctgctcgccgtcgccgcgcagctgctggccctcgcgggtggacgggccggcgcc
agcgaggtgctcaacctggccgccgccgcaccggtgcgggcgcggttcagcttcaccgat
gacgacctggacgccatcaccgcctgggtgcgtgaggccaatatccggtggggactggac
cagccgcaccgcgcaccctatggcgtcgaattcctgcacaacacctggcgattcggtgtc
gaccgggtgctggccggggtcgccatgtccgaggattcgcgggcctggctgggcaccacg
ctgccgctcgacgacgtcagcagcaaccgggtcgagctggccgggcggttcgccgacttc
gtgcagaagctcaccgacaccatccacgcgctgagcggcacccggccgctgtcggactgg
ctgcaggcgctcaccgcaggtatcgaggcgctggccctcgacgaggaggagtggcccgcg
gcccaggtgcagcgcgagttcgccgacatcgccgaccgatccgatccctcggtgctgttg
cggctgagcgatatccgcgcgctactgggccggcatctggccggccggccgacccgcgcc
aacttccgcaccggcaccctgacggtgtgcaccatggtcccgatgcgttcggtaccgcac
cgggtggtgtgcctggtcgggctcgacgacggagtcttcccccggctcggtgcggtcgac
ggggacgacgtactggcccgcgacccggtgaccggcgagcgcgatatccgctccgaggac
cgtcagctgctgctcgacgccatcggcgcggccacccagacgttggtcatcacctacacc
ggggccaacgagtacaccggacaaccgcgccccccggcggtgccgatcgccgaactgctc
gacaccctggccgtctccgcggccggcgtcgaggagctggtgacccggcacccgttgcag
cccttcgatgttcagaacgtgcagcccggcgcgctgatcccggacgcaccgttcaccttc
gaccccaccgtgctggacacggcccgctcgatggccggccggcgcgccccgcaaccggtg
ttcgtgtccggtccactgccggccccgccgcccaccgatgtgtcgctggcggacctgatc
gccttcttcaagaacccggtgaagggtttcttccgcgcgctggactacaccctgccctgg
gaggtggacggggtgtcggatgtgatgccggtggagatcgacgcgctggccgagtggacg
gtcggtgaccggatgctcggcgacatcatgcgcggcatgaccccgcaggacgcccagcag
gccgaatggcggcgcggcacactgccgccgggcaagctcggctggcgccgggccgtggcg
ctgcgcgatcaggtggcgctgctggccgccgaggcgttgcgccaccgccgcgccgacggg
caggcgttcgacgtggacatcgatctcggcgaaggtcgccggctgaccgggacggtgaac
tccgtgttcaccgaccggctggtcagcgtcacctattccaagctcggcggccagcatctg
ctggcctcctggattccgttgttggcgttgaccgctcagcggggccagcggttctcggcg
gtatgcatcggcaggccgccgcgcggcaccgcgccgcgcacccagagcctggatggcccg
aacgactcggtcggcgtgctgcgggacctggtcgacatgtacgacgagggtcggcgccgc
ccgttgccgctgccgatcaagacctcctacgcgtgggccggcgcccgctacgtcggtgac
gacccggcgcaggcggcgacctaccggtggcgcaacgaacgcgacgacccggccatcacc
cgggtgtggggccgcgacccggacctgagcgaactggtcggcctcgacgagtacgcgcag
cggttgtgggtaccgctgctgcacgccgagggggtggcgccgtga
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