Mycolicibacterium diernhoferi: K0O62_06275
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Entry
K0O62_06275 CDS
T07506
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mdf
Mycolicibacterium diernhoferi
Pathway
mdf00521
Streptomycin biosynthesis
mdf00523
Polyketide sugar unit biosynthesis
mdf00525
Acarbose and validamycin biosynthesis
mdf00541
Biosynthesis of various nucleotide sugars
mdf01100
Metabolic pathways
mdf01110
Biosynthesis of secondary metabolites
mdf01250
Biosynthesis of nucleotide sugars
Module
mdf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K0O62_06275 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K0O62_06275 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
K0O62_06275 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K0O62_06275 (rfbB)
00525 Acarbose and validamycin biosynthesis
K0O62_06275 (rfbB)
Enzymes [BR:
mdf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
K0O62_06275 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
Sacchrp_dh_NADP
adh_short
Motif
Other DBs
NCBI-ProteinID:
QYL23900
LinkDB
All DBs
Position
complement(1311907..1312902)
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AA seq
331 aa
AA seq
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MRLLVTGGAGFIGANFVHLTLRENPDVDVTVLDAFTYAGSREALAPVADRIRLVTGDITD
GPVVDALVGAADAVVHFAAETHVDNALADPAPFLHSNVIGTFTVLEAVRRHGTRLHHVST
DEVYGDLALDDPGRFTESTPYNPSSPYSSTKASADLLVRAWVRSYGVRATISNCSNNYGP
YQHVEKFIPRQITNLLTGRRAKLYGAGANVRDWIHVDDHNAAVWRILADGEIGRTYLIGA
DGERDNLSVLRTLLRLMDRDPDDFDHVTDRAGHDLRYAIDASALRSELGWKPTHTDFESG
LRATIDWYRDNESWWGPLKNDVEATYARRGQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctggtcaccggtggcgccgggttcatcggcgccaacttcgtgcacctgacg
ctgcgtgagaatcccgatgtcgacgtgactgtgctcgacgcgttcacctacgccggcagc
cgggaagcgctggccccggtggccgaccggatccggctggtcaccggggacatcaccgac
ggcccggtggtcgacgcgctcgtcggcgcggccgacgcggtggtgcacttcgccgccgag
acccacgtcgacaacgcgttggccgacccggcgccgttcctgcactccaatgtgatcggc
accttcacggtgctggaggcggtacgccggcacgggacgcggctgcaccacgtctcgacc
gacgaggtctacggcgacctcgcgctcgacgatccgggccggttcaccgagagcaccccg
tacaacccgtcgagcccctactcgtcgaccaaggcatccgccgatctgctggtgcgggcc
tgggtgcgctcctacggcgtgcgggcgacaatctccaactgctccaacaactatgggccg
tatcagcacgtggagaagttcatcccccgccagatcaccaatctgctgaccgggcgccgc
gcgaagctgtacggggccggggccaacgtgcgggactggatccacgtcgacgatcacaat
gccgcggtgtggcggatcctggccgacggtgagatcggccgcacctacctgatcggcgcc
gacggggaacgcgacaacctgtcggtgctgcgcaccctgctgcggttgatggaccgcgac
cctgacgacttcgatcacgtcaccgaccgggccggccacgatctgcgctacgcgatcgac
gcatcggcgttgcgttcagaactcggctggaagcccacccacaccgacttcgagtccggc
ctgcgggccaccatcgactggtatcgggacaacgaatcctggtggggtcctttgaagaac
gacgtcgaggccacctatgcgcggcgcgggcagtga
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