Mycolicibacterium diernhoferi: K0O62_09295
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Entry
K0O62_09295 CDS
T07506
Name
(GenBank) DEAD/DEAH box helicase family protein
Organism
mdf
Mycolicibacterium diernhoferi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QYL24425
LinkDB
All DBs
Position
complement(1959674..1966108)
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AA seq
2144 aa
AA seq
DB search
MIEKRITHQLLESGELSLTEREREALALPQHSTTLALELDGDPFFAQWSGKSRQLAGDIL
TERLQDYGQDGGLLRLRLVDGVYRLSILPPGAEMVTIYKSPPTPPIHNKTVAAKVARRRT
VDRQFHADNEYDWSAGASKAIGFLKDARVLLGEQLKAAGFDDLELVELRLQGEELATLDD
FEELLAVDVANVDRMPHQEAVARHALSRLRGRAVLADEVGLGKTIEAGLAVKELTLRGLA
KRVLILCPAPLREQWREEMHQKFDLNFDVALRGTDVHKQDKLIMSLQLGRNSAPKLTAEP
WDIVIVDEAHRAAGAGARKTREFITALTTACRYALFLTATPVQNDLLELYRLVELLRPGT
FTSVQQFKRQFMQGYDPRTPNDPAALRRLISSAMIRTTRAQAGVDRVTRRAVDVPVTLGP
RERELYALCTKLLRSVMTDPGDAMRRRSLALRLTASPFSMGTTALRMAERHPDPKVRAVL
TEVGHLAMDIEKSARENTAIEITHKWLKEHGRVLVFTQHTDTVTGLLRRMEVEGITARSF
HGSMSAGERAATIAAFRSGEAPVMISTDAGAEGQNLQFCNCVLNFDLPWNPMRIEQRIGR
VDRLTQPKDEVFIANLYAQGTIDESVYRLLAEKLRMFELLFGQVTTILGELDDSKSASFE
SRILEALFSDNDKKMQNLLGQLGTELAQARESASTLIAADSGLSNWMASAFEHRKGLSKA
GATELAPEVSERARMRQRRVQTWTRNVLKALGADLLHDTGEGDGAFITAQFDEEYEQELD
GRTLMHLAFDRIGMEHHPDAELCAVGSPVFDEILGLLRMRGDMHATVPVVPDDIGDSPLE
RADNVTLLRRHLVPSGSWSGQATFRAAVGESETTEHLLTADINGHHQTRLPRRPLQDGET
LPAAFGTPSEVIAAFEKAATGQLERLRRDLADKVEADQAAELQRIRTGYSAQIDEASYED
SVRLQRALSSEEKRLSRVPDVRARAKILALTLDEDDWLVEEVWAGPNGAEATLTYPWEDS
EPPLFVSDASGDPIEVLALCSDSHCVSEAETQYCESCDHVLCGACGEDAVFADCPICGLA
SCGACRADGGGLCRGCAFPQRVPELDNEFALAWRLNGGTTLLVGDRVAELHRPDGQSHTL
VRDKDADDPHRKRMRSYAVSNGLPLDCGVTLRNLIGRRDLQDDTRAKLKSASAVATELSI
AATSGSAIDSAAIADVPLHDEANVVPERAMSIGKLLQKLRSEETPPAPPMVMVTRRASFT
DLYLEADGLAKEVSTVCDDGSISVADRQFEPMQWTSPAGDSPIIGNAALDGTQISLQSRN
EAVLVFVSTDGQPQPDTWTACPAGRNLAFQIAGFDYLNSIRMPGGKIGKRIHEITTITAP
FPSPSECTLVEREIRTVAELVDLESGFELESANDESLAALGVRPNHAIAKTTRPLPTGLS
TALLTKTSRPFTASLRNGLEVKENWRGHGTAVHTYRTFDGQPLSPLGSPETDFGVCRDGH
FYPGGTAALCGSCRAWACPSCDELDHLASLPCPGCYVSVCRRCLSSEHDAPAERCVVCRD
HACSDCGRDPEVNCCPMCDRTVCGSCRVEETCPACAHLATATDSQRASLPQSLVLSGAEV
RIGSDADASVVLIKRGETVEQAIVRNDSIIVWKVFDKNSIDNAYRLALAASGILEAQVTP
KIHSVEPEQPRDGSRFIVSTERSYRPAWSVEQLQASGSGTQSFNDPVGDLIPIIAPEFPS
PRKEPTPASIAPGRLAHEFANMSTPLTAGLDIFWERFGYDICISSQGLCRTTIERSVAED
TTAGWVAATATPQWVSDDWEPVPAVRAYASSNGAPTAEAAVVQLASMTALGVRIAGQTSW
YAINRSENAATATALSRWLGLGDADTVSVFTDPRQVRLSSVTNAVRSSVTVNPIGTISTG
PQVGADVSGDAHMAWNPPTSARVPQLEKLPDRLRINLAQAFQPTTAWAQLEVGAHIEQLV
TVEDGHDWRYERTLAAGQMEARRVNGSTGSLFDSGAIDREGHFGAGFAFCNYCGGATCAV
CIDKAVACDACAVNICKRCVSQPQANLWLCPACTAVRPPTRGEAREHGRLLSTRRMLIGS
DAQHTVVVERSKNHWTRKVADGEKQVIVNPSVNEYLDGRLDTAD
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atgattgagaagcggatcacccaccagctgttggagtcgggggagctttcgctcaccgaa
cgggaacgtgaggcattggcgctgccccagcacagcaccacgctcgccctcgaactggac
ggtgaccctttcttcgcccaatggagcggcaagagcaggcagctggccggggacatcctc
accgaacggttgcaggactacggccaagacggtgggctgctccgccttcgcctggtcgac
ggtgtctaccgcctgtccatactgcccccaggcgccgagatggtcaccatctacaagtcg
ccaccaaccccgccgatccacaacaagaccgtggctgcgaaggttgcgcgacgtcggacc
gtcgaccgtcagttccacgccgacaacgagtatgactggtcagccggcgcgagcaaagcg
atcgggtttctcaaggacgcccgcgtactgctcggcgagcaactcaaggccgccggcttc
gacgatctcgaactggtcgagctgcgactgcaaggcgaagaactggccacgctcgacgat
ttcgaagaactgctcgccgtcgacgtcgccaatgtcgaccggatgccacaccaggaggcc
gtcgcgcgacatgcgttgtcacgcttgcgcgggcgcgccgtactcgccgatgaggtcggc
ctcggtaagaccatcgaagccggcctggccgtcaaggaactgaccctgcggggtttggca
aaacgcgtgctcatcctgtgccccgctcccctacgcgagcagtggcgcgaggagatgcac
cagaagttcgacctgaacttcgacgtcgcccttcgcggtaccgacgtacacaaacaagac
aagctgatcatgagcctgcagctcggacgcaattcggccccgaagctgaccgcggaaccc
tgggacatcgtcattgtcgacgaggcgcaccgtgccgccggtgccggcgctcggaagacc
cgcgaattcatcaccgccctgaccaccgcgtgtcggtatgcccttttcctcaccgcgacc
ccggttcagaacgacttgctcgagctctaccggctggtcgagctgctgcgtccgggcacc
ttcacctccgtacagcaattcaagcggcagttcatgcagggatacgacccgcgtactccg
aatgatcctgcggcactgcgtcgtctcatcagcagcgcaatgatccgcacgacccgcgct
caggccggtgtcgaccgtgtcacccgccgcgccgtggacgtgcctgtgacgctcggcccg
cgcgagcgtgagctctacgcgctgtgtacgaagctactgcgcagtgtcatgaccgacccc
ggggacgcgatgcgtcggcggagcctggcactccggctcacggccagcccgttctcgatg
gggaccaccgcgctgaggatggccgagagacatcccgacccgaaggtgcgggcggtgctc
acagaagtcggccaccttgcgatggatatcgagaagtccgcacgtgagaacaccgcgatc
gagatcacccacaagtggctcaaagagcatggtcgggtactggtcttcacccagcacacc
gacaccgtgaccggtctcctccgccggatggaggtcgagggaatcaccgcgcgctcgttc
cacggatcgatgtctgccggtgaacgcgccgctaccatcgccgcgttccggtcgggcgaa
gccccggtgatgatctccaccgacgcaggcgcagaaggtcagaacctgcagttctgtaac
tgcgtcctcaacttcgacctgccctggaatccgatgcgaatcgagcagcggatcgggcgc
gtcgaccgcctcactcagcccaaggacgaggtgttcatcgccaacctgtatgcgcagggc
accatcgacgaaagcgtgtatcggctgctcgccgagaagctacggatgttcgagcttctg
ttcgggcaggtcaccacgatcctcggtgaactcgacgattcgaaatccgccagcttcgaa
tcccggatcctcgaagcgctcttctcggacaacgacaagaagatgcagaacctgctcggt
caactcggtaccgagctcgcgcaggcccgcgagagcgcatccacgctcatcgctgccgac
agcgggctgagcaactggatggcctcggcgttcgaacatcgcaaaggcctgtccaaggcc
ggagccaccgaactggcccccgaagtaagcgagcgcgcacgcatgcggcaacgtcgggtg
caaacctggacgcgcaacgtcctcaaagccctgggcgcagatttactccacgacaccggg
gagggtgacggagcgttcatcacggcacagttcgacgaggagtacgaacaggaactcgat
ggccgaacgctgatgcacctcgcgttcgaccgcatcggcatggagcaccatccggatgcc
gagctgtgcgcggttggctcaccggtattcgacgagatcctcggcctgctccgtatgcgc
ggcgatatgcacgcaaccgtgccggtggtgcccgacgacatcggcgacagcccgctcgaa
cgggccgacaatgtcacgctgctccgccgacaccttgtcccctcgggctcgtggagcggg
caggcaacgttccgtgctgcagtgggcgagagtgaaacaaccgagcacctgctgaccgcg
gatatcaacggccaccaccaaactcgactgcctcgccggccgctgcaggatggtgaaaca
ctgccggcggcgttcggcaccccgtcggaggtcatcgctgcgttcgagaaggccgcgacc
ggtcagttggagagactccgccgcgacctggcggacaaggtggaagcggaccaggcggcg
gaactgcagcgtatccgcaccgggtattcggcacagatcgacgaggcctcctacgaggac
agtgtccggctgcagcgcgcgttgagttcagaagagaagcgcctcagccgggttccggac
gtgcgtgcgcgggcgaagatcctcgcactcaccctcgatgaggatgactggttggtcgag
gaggtttgggcaggcccaaacggtgccgaagccacgttgacctatccgtgggaggattcg
gagccgccacttttcgtgagcgacgcatccggggacccgatcgaagtcctggcattgtgc
tcggactcgcactgtgtcagcgaagcggagacgcagtactgcgagtcctgcgatcacgtc
ctctgcggggcctgcggtgaggatgccgtgttcgccgactgcccgatctgcggactggcc
agctgtggcgcctgccgcgcggatggcggcgggttgtgccgcggttgcgcgttcccgcag
cgggtacccgagttggacaacgaattcgcgctcgcctggcgcctgaatggcggaacgacc
ctgctggtcggcgaccgtgttgctgaactgcatcggccggacggacagtcgcacactctg
gtgcgcgataaggatgccgatgatccgcaccggaagcggatgcggtcgtacgccgtgagc
aatggcctgccgctggactgcggtgtcacactgcgaaatctcatcgggcgtcgcgatcta
caggacgacacccgggccaaactgaaatcagcatcagcggttgcgacagagctcagcatt
gccgcgacgagcggttccgccatcgattcggcagcgatcgccgacgttccgctgcacgac
gaggcgaacgtcgtgcctgaacgcgcaatgagcatagggaagctgctgcagaagctccga
tcggaggaaacacccccggccccgcccatggtgatggtcacccgtcgcgccagcttcacg
gatctatatctggaagcggatggtctcgccaaagaggtgtccacggtatgcgacgacggc
agcatctccgttgccgatcgccagttcgaaccgatgcagtggacgagcccagccggcgat
agtccgataatcggcaacgccgccctcgatgggacacagatttcgcttcaatctcgaaat
gaggcagtacttgtctttgtatcgacggacgggcagccacaacccgatacgtggaccgca
tgcccggccggcaggaaccttgcattccagatcgccggcttcgactatctcaactcgatc
cgaatgccgggcggcaaaatcggcaagcgcatccacgaaataaccaccatcactgcgccg
ttcccttcgccgagcgagtgcactcttgttgaacgtgagattcgcaccgtcgcggaactt
gtcgacttggaatccggtttcgagctggagtcagccaacgatgagtcattggccgcgctt
ggcgtccgcccgaaccacgcaatcgcaaagacgactcgcccattacctacggggttgagt
acagcactgctgaccaagacgagccgtcccttcaccgcgtcactgcgcaacggattggaa
gtcaaagaaaattggcgtgggcatggcaccgccgtccacacgtaccggacctttgacggt
caaccgctgagcccgttgggttcgccggaaaccgacttcggtgtctgccgcgacggccac
ttttaccccggcggcaccgctgcgctctgcggctcgtgtcgtgcctgggcgtgcccgtcc
tgtgatgagctggaccatttggcgtcgctaccgtgccccgggtgttacgtctcagtgtgc
cggcgttgtctgtcaagcgaacatgatgcacccgctgaacgatgcgtcgtctgcagagac
cacgcgtgctcagattgcggacgagatcccgaagtcaattgttgcccaatgtgcgaccgc
acggtgtgcggaagctgccgcgtcgaggaaacctgtcctgcgtgcgcgcatctggccacc
gcaaccgattctcaaagagcctcgctgccccagtcgctggtgctgtcgggcgccgaagtt
cgtatcggatccgacgccgacgccagcgttgtgctcatcaagcgcggcgaaaccgtcgag
caggcgatcgtccgcaacgactcgatcatcgtctggaaggtgttcgacaagaacagtatt
gataatgcttaccggcttgccttggccgccagcggcatcctcgaagctcaagtgacgccc
aagattcacagtgtcgagcctgaacaaccccgcgatggctcacggttcatcgtcagcacc
gaacgctcataccgtccggcctggtccgtcgagcagctacaggcctccggttctggtacc
caatctttcaacgaccccgtgggcgatctgatccccatcatcgcaccggagttcccctcg
ccgagaaaggaacccacacccgcgtccatcgcgcctggacgactggcacacgaattcgca
aacatgtcaacgccgctgaccgccggccttgacattttttgggaacgcttcggttacgac
atctgcatctcctcgcagggactgtgcaggaccacaattgaacgttcggtcgccgaggac
accacagcgggatgggttgcggcgacggcgacaccgcagtgggtcagtgacgattgggaa
ccggtcccggccgtgcgggcatatgcatcgagcaacggcgctccgacggcagaagccgcg
gtcgtccaactggcctccatgactgcgctcggggtccggatcgctgggcaaaccagctgg
tacgcaatcaacagatccgagaatgccgcgacagcaaccgccttgtcacgatggttgggc
ctcggagatgccgacacagtcagcgtgttcaccgacccccgacaggtacggctctcctcc
gtcaccaatgcagtgcgatcatccgtcaccgtgaatccgataggcacgatcagcaccggc
cctcaggttggagccgatgtctcgggggacgcgcatatggcgtggaacccaccaacgagc
gcccgggtgccgcaactggaaaagcttccagatcggctacgcatcaaccttgcacaggcg
ttccagccgacaaccgcgtgggcacagctggaggtcggggcgcatatcgagcaacttgtc
accgtcgaggacggccacgattggcgctacgaacgcacgctcgcagccgggcagatggag
gctcgccgcgtcaatggcagcacgggctccctgttcgattcaggggcaatcgaccgagaa
ggtcacttcggcgcaggctttgcgttttgtaactactgcggcggggcgacgtgtgcggtc
tgcatcgacaaggcggtggcgtgcgacgcatgcgccgtcaacatctgcaagcgctgcgtg
agtcaaccgcaggccaacctgtggctgtgcccggcatgcacggcagtgcgaccgccgaca
cggggtgaagcccgcgagcacgggcgtctactgtcgacgcggcgcatgctaatcggctcc
gatgctcagcacaccgtagtcgtggagcggtccaagaatcactggacacgcaaggttgcc
gatggcgagaagcaggtgatagtgaacccgtctgtgaacgagtacctggacggacggctt
gacacggcggactga
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