Mycolicibacterium diernhoferi: K0O62_09300
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Entry
K0O62_09300 CDS
T07506
Name
(GenBank) RecQ family ATP-dependent DNA helicase
Organism
mdf
Mycolicibacterium diernhoferi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C_2
Helicase_C
RNase_T
RecQ_Zn_bind
ResIII
RNase_H_2
HTH_20
FAM186A_PQQAQ
Motif
Other DBs
NCBI-ProteinID:
QYL24426
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All DBs
Position
complement(1966101..1971311)
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AA seq
1736 aa
AA seq
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MSTPERPMPPAAETAHRLLLEHGPLSAPELREQLRKEGFAQTLERLQQWPDRFPHRFAVT
DDGLLHVAVAYKSHPVTDPNPTDGPWYSPQPDRVPLDRVAVLDIETTGLNKATDFITEIA
LARLDGTQLMSVEVAVPDGQVGADAVTLSHALDVLATRLQSADLLIGHNLLAFDLPFLVQ
AAKRHGLSVPQFPPSADSLHLSLLVDVALPNRQLADLTLRYGITNQEAHRAHSDATATAA
VIRALLAEVDVAEPSWQLAIATLETHRNPLALLLPSLPGPPELSTLHRDPDPLLNPAGPK
ASDAWSGTRDTFPVLRELRNLRKRPAQEEMAHAVAEVFDRGGNLAVEAPTGTGKSLAYML
PALARASRPRQPVIIATATKALQGQLRAEAARLQQENLLGAPFRQLQGVANYVCARELED
AVADQETSGLALAVAFRAIAESPTGTWDDVTDDVLKRSDARYARTRARLRTNAAGCDRAG
CTWAKICPVVQQSEGLASTPGVVSINHALMAAWVTAAKAPGDIFADRRADVVFDEAHALE
DSLTSAWTGRVDAIDLEIVVNSLNPRARMMRDIRKRSNGRTEVKEAIDSIASSCDAIRAA
GIEFTQAVTTYLHEYGGRAHAAVLQSGIVNSRPEFRVLRQSASTLRYALIQLGKAVSALG
QSLSGVEGVGSAKRRLNGHAERIDNAVSILETLGPLPDSHRWVYRLAAEEDDPDAWAYEL
LPIHVFPEFQQFVVDRMHSTVLCSATLTVEQRFDYLSSRLGIEIDPTAADGGFRGLRLQS
PFDYAKQSKVVLTNHLPIPIPVNEREFCEEMAADQAGFLSLSGGKTLILFAARTRMEIVA
DGVRAKAAELAERGVELLVQGEHGRSQISHRFNSEPGTVLYGLKSYWEGFDAPGETLSYL
FIEKPPYPHPDDPLVSARQRAIAERGGDPFLEYVLPMTAMQFTQGFGRLIRSENDIGAAL
ICDRRLHSPTQAQRVLLGSLPGPAIHEAIDRDDAWTTAIEFVTGTAPDLSTAISFGRDDV
SQLLENLRLLEGEDPTAKLIEAAEKLFGITDLHPKQLEVMRAIIDGQDVMAVLPTGFGKS
LCFQLPALLAPQARATVVVSPLIALIKDQVNDLRGRRGIRPVQGITGTTSRVVQTDILRD
TASGHVRLLYVSPERLARDPVLRGALGRQQLNRVVVDEAHCVSVWGHDFRPEFRQVPASV
ATFDTRPPRAGFTATATPEVETDIVGAMDMLDPAVVREPSDRPNLRFRVHRCVDERDRVR
ELLRFVTWSEKKPGIVYVTKRALAEEIAAMLRRAGHAARAYHAGMVPEQRDAVQEDFDSD
TTRIIVATKAFGMGINKPNIAWVVHYDLPDSLDGYAQEAGRAARAPDVTGDCVLFYTRGD
IARRRRLINSHESKADAQITQQLLTLLWTCPERGDSRVFDVDELADKLGIDDDEVNVHLA
QLERVGALKLGLDCSARGTVDVGFREPTDEDERRLFRELFYKANRARPNVRVQIDFHQLR
DERGYDPDELEQKLIDWSLDRFVTFSSSRRLRRVRLLSHLAPRDALERESTRWKQWQQRR
LQAMIDYAEQASSCRRIAIGEHFGDTVADCTSRDIVTCDRCNDESPPWAALPDHMVPDPE
LLVNAELTVLQAVGWASAFKKGAYGEASLRAAVLGLESLGEGRPLGAGVLSCPQFGALRH
VRNGEKRWNTAVEKLLAEGFIDRRTVERESTRTPYQSLVLTPRGAQTLGITVTQDD
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcccgagcgccccatgccgccggccgccgagacggcgcatcgtctgctgctc
gaacacggcccgctgtcggcacccgaactcagagaacagctccgcaaggagggtttcgcc
caaaccctggagcggctccagcagtggccggatcggttcccccaccgctttgccgtcacc
gacgacgggctcctccacgtggcggtcgcgtacaagagccaccccgtcaccgaccccaac
cccaccgacggaccctggtactcaccgcagcctgaccgcgtcccgctggaccgagtggcg
gtgctggatatcgagaccaccggcctcaacaaggccaccgatttcatcaccgagattgcc
ttggcccggctggacggtacgcaactgatgagcgtcgaggtggcggtaccggacggccaa
gtcggcgctgacgccgtgacgctgtctcatgccctggatgtcctggccacccggttgcag
agtgccgatctgctgatcgggcacaacctgctcgccttcgatctgccgtttctggtgcag
gccgcaaagcgtcatggactgtcggtcccccagttcccgccgagcgccgacagtctgcac
ctctccctcctcgtggatgtggcgctacccaaccggcagctcgccgacctcacgctccgc
tacggcatcaccaaccaagaggcgcatcgtgcccactcggacgccacagcaaccgccgcc
gtcatccgcgccctactggccgaggtcgacgttgccgaacccagctggcaactcgccatc
gcgaccctggaaacccaccgcaatccgctcgcgctgctgctgccatcgctacccggccca
cccgagttgtccacgctgcaccgggatcccgacccgctgctgaacccggccggccctaag
gcctccgatgcatggtcgggcactcgggacaccttcccggtcctgcgcgagctgcgcaat
ctccggaaacgacccgcgcaggaagaaatggcccacgccgtcgccgaggtcttcgaccga
ggtggcaatctcgcggtcgaggcacccaccggaaccggtaagtcgttggcgtacatgctg
ccggcactcgcccgtgcatcacgtccccgtcagcccgtaatcattgcgactgcaacaaaa
gcgctccagggacagttgcgcgccgaagcggcccggctgcagcaggagaacctcctcgga
gccccgttccgccagctgcagggcgtcgccaactatgtctgcgcccgggaactcgaagac
gcggtcgccgatcaagagacctcaggtctggcgttggcggtcgccttccgggcgatcgcc
gagtcccccaccggcacctgggatgacgtcaccgacgacgtcctcaagcgttcggacgcc
cggtatgcgcgcacccgtgctcgcctgaggaccaacgcggcgggatgcgaccgcgccggc
tgcacctgggccaagatctgcccggttgtccagcagagcgagggtcttgccagcacgcca
ggcgtggtgtcgatcaaccacgccctgatggcagcctgggtcaccgccgccaaggcaccc
ggcgacatcttcgccgaccgccgagccgatgttgtcttcgacgaggcgcacgccctcgaa
gattccttgacctcggcgtggaccggccgggtcgacgccatcgacctcgaaatcgtcgtc
aactccctgaatccccgtgcccggatgatgcgcgacatccggaagcggtcgaacggtcgt
accgaggtcaaagaggccatcgacagcatcgcgagcagctgcgatgcgatccgcgcggcc
ggcatcgagttcacccaggccgtcaccacctacctccatgagtacggcggtcgggcgcat
gcagcagtcctccagtccggaatcgtcaactctcgccccgaattccgagtgttacgtcaa
tcggcatcgacgttgcggtacgccctgatccaactggggaaggcggtgtccgcgctgggg
cagtcgctgagcggcgtcgagggcgtcggttcggcgaagcgccgactcaacgggcacgcc
gagcggatcgacaacgctgtctcaattctggagacactgggaccgctgcccgacagccac
cgctgggtgtaccggctggccgccgaagaggacgatccggacgcctgggcctacgagctg
ctgcccatccacgtcttcccggaattccagcagttcgtggtcgaccggatgcattcgacc
gtgttgtgctcggccaccctcaccgtcgagcagcgcttcgactacctcagctcgcgcctg
gggatcgagatcgatcccacagcggccgatggcggcttccgcggcctacgtctgcagtcg
ccgttcgactacgcgaaacagtcaaaggtggtcctcaccaaccacttaccgatccccatc
ccggtcaacgagcgggagttctgtgaggagatggccgcagaccaggccgggttcctcagc
ctttccggcggcaaaacactgatcctgttcgccgcgcggacccgaatggagatcgtcgcc
gacggcgtccgcgcgaaggctgccgaacttgctgaacgcggagtcgagcttctcgtccag
ggtgaacacggccggtcgcagatctcacatcggttcaattccgagccgggcaccgtgctc
tacgggctcaaatcgtattgggagggcttcgacgcccccggcgagaccctgtcctacctg
ttcatcgagaagcccccgtacccgcatcccgacgatccgctcgtgtcggcacgccagcgc
gccatcgccgaacgcggcggtgacccgtttcttgagtacgttctgccgatgaccgccatg
cagttcactcagggcttcggtcggctcatccgctccgagaacgatatcggcgccgcactg
atctgcgaccgccggctgcactcaccgacacaggcacagcgggtactactggggtcgctg
cccgggccagcaatccatgaggccatcgatcgcgacgatgcgtggacgacggccatcgaa
ttcgtcaccggcacagcacccgacctcagcacggcgatctccttcggccgcgacgacgtc
agtcaactgctggagaacctgcggctcctcgaaggtgaggatccgaccgcgaagctcatc
gaagctgcagagaaactgttcggcatcaccgaccttcaccccaaacagctcgaagtgatg
cgcgcgatcatcgatggccaggacgtgatggccgtgctgcccacggggttcggcaagtcc
ttgtgcttccagctaccggcactgctcgccccgcaggctcgcgccacggtggtcgtgtct
ccccttatcgcactgatcaaggatcaggtcaacgacctgcgtggccggcgcggcatccgt
ccggtccagggcatcaccggcaccacgtcgcgggtggtgcagacagacatcctgcgcgac
accgccagtgggcacgtccggctgctgtacgtctccccggaacggctggcccgagacccg
gtgctccgcggggctttggggcgccagcagctcaaccgtgtcgtggtcgacgaggcacac
tgcgtttcggtgtgggggcacgacttccgaccggagttccggcaggtacccgcatcggtg
gcaaccttcgacacccgcccgccccgcgccggtttcaccgcgacggccacgcccgaagtg
gagaccgacatcgtcggggccatggacatgctcgaccccgccgtcgtgcgggagcccagc
gaccgccccaaccttcgtttccgcgtccatcgatgcgtcgacgagcgggacagggtccga
gagctgctccggttcgtcacctggtccgagaagaagcccggcatcgtgtacgtcaccaaa
cgtgcactcgccgaggagatcgcggcaatgctgcgtcgcgccgggcacgctgctcgcgcc
tatcacgccggtatggtccccgaacaacgcgacgccgtccaggaagacttcgactctgac
acgacccgaatcatcgtggccaccaaagcgttcggcatgggcatcaacaaacccaacatc
gcctgggtggtccactacgacctcccggactcgttggatggatacgcccaggaagccggc
cgtgccgcacgtgctcccgatgtcaccggcgattgcgtgctcttctacacccgcggcgat
atcgcccgacgtcgccggttgatcaattcgcacgagtcgaaggccgacgcgcagatcacc
cagcagttgctgacgctgctgtggacatgtcccgagcgcggtgacagtcgagtattcgac
gtcgatgagttggcggacaaactcggcatcgacgacgacgaggtcaatgtgcacctggcc
cagctcgagcgagtcggcgcgctgaaactcgggctggactgctcggcccgcgggacggtg
gacgtcggattccgcgaaccgaccgacgaggacgaacgccgtctgttccgggagttgttc
tacaaggcgaaccgagcacgccccaatgtccgcgtccagatcgacttccaccagctccgt
gatgaacgcggctacgaccccgacgaactggagcagaaactgatcgactggtccctggac
cggttcgtcacgttctccagctcccgccggctccgcagggtccgtttgctctcccacctc
gcgccgcgggacgcactcgaacgcgagtccacacgctggaagcagtggcaacaacgccgc
ctgcaggcaatgatcgactacgccgaacaggcctcgtcgtgtcgccggatcgccatcggc
gagcatttcggtgacaccgtcgccgactgcacgagccgggacatcgtcacctgcgaccgc
tgcaacgacgagtccccaccgtgggcggcgctacccgaccacatggtccccgacccggaa
ctccttgtgaacgccgaactgaccgtcctccaggcggtggggtgggcatcggccttcaag
aagggtgcttacggtgaggccagcctgcgtgccgccgtgctcggtctggaatcgctcggc
gagggcagaccgctcggcgcgggcgtcctcagttgcccccagttcggggctctccgccat
gtgcgcaatggggagaaacggtggaataccgcggtggagaaacttctcgccgaaggcttc
atcgatcggcgcaccgtggaacgggagtcgacccgcacgccttatcagagtctcgtcttg
acccctcgcggcgcccaaacactcggaatcacggtgacacaggatgattga
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