Mycolicibacterium diernhoferi: K0O62_21080
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Entry
K0O62_21080 CDS
T07506
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mdf
Mycolicibacterium diernhoferi
Pathway
mdf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0O62_21080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdf03000
]
K0O62_21080
03400 DNA repair and recombination proteins [BR:
mdf03400
]
K0O62_21080
Enzymes [BR:
mdf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K0O62_21080
Transcription factors [BR:
mdf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
K0O62_21080
DNA repair and recombination proteins [BR:
mdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0O62_21080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TPP_enzyme_M
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QYL21486
LinkDB
All DBs
Position
4453558..4455054
Genome browser
AA seq
498 aa
AA seq
DB search
MHDDFDRCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPLAQNLRFYPTAAAAQKA
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGAVDRCGVTGLAAQLGYTTRQLERL
LQAEVGANPLALARAQRTQTARVLIETTDLPFSDVAFAAGFSSIRQFNDTVRSVCALTPT
ALRRRARARSRDEAVGPDALSLRLPVRAPFAYEGVFGHLAAGAVPGVEEVRDGAYRRTLR
LPSGSGVVALTPHPDHVRCRLVVDDFRDLAAAIARCRRLLDLDADPAAIIDALGTDPHLG
PLVAKAPGQRIPRTVDEQELAVRVVLGQQVSIKAARTHAGRLAETHGTPFTDTGGGLTRV
FPSVDQLAGLDPTTLAMPATRRRTLSTLIAAMADGDVDLSAGADWNRARTRLAALPGVGP
WTTELIAMRGLGDPDAFPVTDLGVRIAAEAVGLPAAADTLLTRSARWRPWRAYVTQHLWT
ALDHAVNEWPPRTNRQEK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgattttgaccgctgttaccgagccgtccagtccaaggacgcccggttcgac
ggctggttcgtcaccgccgtgctcaccacgggcatatattgccggcccagttgcccggtg
cgcccgccgctggcccagaacctgcggttctacccgaccgcggcggcggcccagaaggcc
ggtttccgggcctgtaaacggtgccgcccggatgcgtcccccggttcgcccgaatggaat
gtccgcggtgacgtggtggcccgcgcgatgcggctgatcgccgacggcgcggtcgaccgc
tgcggtgtcaccgggctcgccgcccagctggggtacaccacccgtcagctcgaacggctc
ctgcaggccgaggtgggggccaacccgctggcgctggcccgcgcccagcgcacccagacc
gcgagggtgctcatcgagacgaccgatctgccgttcagcgatgtcgcattcgccgccggg
ttcagcagcatccggcagttcaacgacaccgtgcggtccgtctgcgccctcaccccgacc
gccctgcgccgacgcgcccgcgcccgcagccgcgacgaggccgtcggccccgacgcgctg
tccctgcggctgccggtgcgcgccccgttcgcctacgaaggtgtcttcggtcatctggcg
gccggcgcagtgcccggggtggaggaggtccgcgacggggcctaccgtcgcaccttgcgg
ctgccgtccgggtccggtgtggtggcgctgacccctcatcccgaccacgtgcgatgccgc
ctggttgtcgacgacttccgggacctcgccgcggcgatcgcccgctgccgccgcctgctg
gacctcgatgccgatcccgccgcgatcatcgatgcgctgggtacggacccgcacctgggt
cccctggtggccaaggccccggggcaacgcatcccgcgcacggtcgatgagcaggaattg
gcggtgcgagtggttctcggtcagcaggtctccatcaaggccgcccgcacccacgccggc
cggctcgccgagacgcacgggacgcccttcaccgataccgggggcggactgacccgcgtc
ttcccctctgtcgatcagttggccgggctggatccgaccaccctggccatgccggccacg
cggcgccgaacgctgagcaccctgatcgccgcgatggccgacggcgacgtggacctgagc
gcgggagccgactggaatcgggcgcgaacgcgattggccgcgttgccgggcgtcgggccg
tggaccaccgaactgatcgccatgcggggtctcggcgatccggatgccttcccggtgacc
gacttgggagtccggatcgcggcggaggccgtggggctaccggcagccgcggataccctg
ctcacgcgaagcgcacgttggcgcccgtggcgggcctacgtgacacagcatctgtggacg
gcgctcgaccatgcggtcaacgagtggccgccccgcacgaatcggcaggagaaatga
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