Mycolicibacterium diernhoferi: K0O62_26455
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Entry
K0O62_26455 CDS
T07506
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mdf
Mycolicibacterium diernhoferi
Brite
KEGG Orthology (KO) [BR:
mdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdf03032
]
K0O62_26455 (topA)
03400 DNA repair and recombination proteins [BR:
mdf03400
]
K0O62_26455 (topA)
Enzymes [BR:
mdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K0O62_26455 (topA)
DNA replication proteins [BR:
mdf03032
]
Prokaryotic type
DNA Topoisomerases
K0O62_26455 (topA)
DNA repair and recombination proteins [BR:
mdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0O62_26455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QYL22441
LinkDB
All DBs
Position
complement(5559922..5562747)
Genome browser
AA seq
941 aa
AA seq
DB search
MADDDRSRAGAGNVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRAAADVPAKY
KSEPWARLGVNVDADFEPLYIVSPDKKSTVTELKSLLKDVDELYLATDGDREGEAIAWHL
LETLKPRIPVKRMVFHEITEPAIRAAAESPRDLDIDLVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAELDASVSDPQAAPPKFTAKL
NTVDGRRVATGRDFDSLGAVRKPDEVRVLDEAAAAALATGLRGAQLTVSSVEQKPYTRKP
YPPFMTSTLQQEAGRKLRFTSERTMSIAQRLYENGYITYMRTDSTTLSESAINAARTQAG
QLYGQEYVHPTPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSALDTDEFRLYELIWQR
TVASQMADARGTTLSLRIAGQAAGGEQVVFNASGRTITFPGFLKAYVESLDDQAGGEADD
AESRLPNLTQGQRVDAADLTADGHTTSPPARYTEASLIKALEDLGIGRPSTYSSIIKTIQ
DRGYVHKKGSALVPSWVAFAVIGLLEQHFSRLVDYDFTAAMEDELDEIAAGNERRTNWLN
NFYFGGEHGADGSVAREGGLKQLVGGNLEGIDAREVNSIKLFDDAEGRAVNVRVGRNGPY
LERMIADPDNPGELKPQRANLKDELTPDELTLELAEKAFATPQEGRSLGVDPETGHEIVA
KDGRFGPYVTEILPEPPDDGEAGSPAKKGKKPTGPKPRTGSLLRTMDLETVTLEDALKLL
SLPRVVGVDPESKEEITAQNGRYGPYLKRGTDSRSLATEEQMFTITLDEALKIYAEPKRR
GRQGAATPPLRELGVDPVSEKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERASEL
LADRRARGPVKKAAKKAPAKKAAAKKTAAKKAPAKKAAKKA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgacgaccggagccgggcaggcgccggtaacgttcggcggctcgtgattgtc
gagtcgccgactaaagcacgcaagattgcgggctacctcggctccaattacatcgtcgaa
tcctcccgtggccacatccgtgacctgccgcgagctgccgccgatgtgcctgcgaagtac
aagtccgaaccgtgggcgcgtctcggcgtcaacgtcgatgcggacttcgaaccgctctac
atcgtcagcccggacaagaagagcaccgtcaccgagctcaagagcctgctcaaggacgtc
gacgagctctatctcgcgacggacggtgaccgtgagggcgaggcgatcgcctggcatctg
ctcgaaacgctcaaaccgcgcatcccggtcaaacggatggtgttccacgagatcaccgag
ccggcgatccgggccgccgcggaaagcccacgtgacctggacatcgacctggtagacgcg
caggagacccggcgcatcctggaccggctctacggctacgaggtctcacccgtgctgtgg
aagaaggtggccccgaagctgtcggccggccgcgtgcagtcggtggcgacccgcatcatc
gtgcagcgtgaacgcgagcggatggccttccgcagcgccgggtactgggatgtcaccgcc
gagttggacgccagcgtgtccgatccgcaggccgccccgccgaagttcaccgcgaaactg
aacaccgtcgacgggcgccgggtggcgaccgggcgcgacttcgactccctcggcgcggtc
cgcaagcccgacgaggtgcgggtgctcgacgaggccgccgcggcggcgctggccaccggg
ctgcgcggggcacagttgaccgtctcctcggtggagcagaagccctacacgcgcaagccc
tacccgccgttcatgacctcgacgctgcagcaggaggccggccgcaagctgcgcttcacc
tccgagcgcaccatgagcatcgcgcagcggctgtacgaaaacggctacatcacctacatg
cgtaccgactcgaccacgctgtcggagtccgcgatcaacgccgcccgtacgcaggccggt
cagctctacggccaggagtacgtgcaccccaccccgcgccagtacacccgcaaggtgaag
aacgcgcaggaggcccacgaggcgatccgccccgccggcgacgtgttccagaccccgggt
cagttgcacagcgccctggacaccgacgagttccggctctacgagctgatctggcagcgc
accgtggcctcgcagatggccgacgcgcgcggcaccacactgagcctgcggatcgccggc
caggccgccggtggcgagcaggtcgtgttcaacgcctccgggcgcaccatcaccttcccg
ggtttcctgaaggcctacgtcgagagcctggacgaccaggccggtggcgaggccgacgac
gccgagagccgcctgcccaacctcacccaggggcagcgggtcgacgccgccgatctcacc
gcagacgggcacaccacctcgcccccggcccgctacaccgaggcctcgctgatcaaggcg
ctggaagacctgggtatcgggcggccgtcgacctacagctcgatcatcaagacgatccag
gaccgcggctacgtccacaagaagggcagcgcgctggtgccgtcctgggtggcgttcgcg
gtgatcgggctgctggaacagcatttcagtcggctggtcgactacgacttcaccgccgcc
atggaggacgaactcgacgagatcgccgccggcaacgagcgacggaccaactggctcaac
aacttctacttcggtggcgagcacggtgcggacggctcggtcgcccgggagggcgggctc
aaacagctcgtcggcggcaacctggagggcatcgatgcccgagaggtcaactccatcaag
ctgttcgacgatgccgaggggcgcgcggtcaatgtgcgcgtcggccgcaacgggccgtac
ctggagcggatgatcgccgacccggacaatccgggtgaactcaagccgcagcgcgccaac
ctcaaggatgagctgacgccggacgagctgaccctcgagctcgccgaaaaggctttcgcc
acaccgcaagagggacgatcgctgggcgtcgatccggagaccgggcacgagatcgtggcc
aaggacggacgattcggcccgtacgtcaccgagatcctgcccgagccaccggatgacggg
gaggcgggcagcccggcgaagaagggcaagaagcccaccggtccgaagccgcgcaccggt
tcgctgctgcgcacgatggatctggagacggtcaccctcgaggacgcactcaagctgctg
tcgctgccgcgggtggtgggtgtcgatcccgagagcaaggaagagatcaccgcgcagaac
ggccgttatggcccatatctgaagcgcggcaccgactctcgatcgttggccaccgaagag
cagatgttcaccatcaccctcgatgaggcgctgaagatctacgccgaacccaaacggcgg
ggccgtcagggtgctgccaccccgccgctgcgcgagctcggggtggatccggtgtcggag
aagccgatggtgatcaaggacggccggttcggcccctacgtcaccgacggcgagaccaac
gccagcctgcgcaagggtgacgacgtgctgtcgatcaccgacgagcgggcctcggagttg
ctggccgatcgtcgggcccgtggtccggtgaagaaggccgccaagaaggctccggcgaag
aaggccgccgccaagaagacggccgccaagaaggcgccggctaagaaggccgcgaaaaag
gcctga
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