Metabacillus dongyingensis: K8L98_00705
Help
Entry
K8L98_00705 CDS
T07997
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K8L98_00705 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdg03021
]
K8L98_00705 (rpoB)
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_00705 (rpoB)
Enzymes [BR:
mdg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K8L98_00705 (rpoB)
Transcription machinery [BR:
mdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K8L98_00705 (rpoB)
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K8L98_00705 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
UAL52433
LinkDB
All DBs
Position
129728..133309
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYSVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVA
YVRIDRTRKLPVTVLLRALGFGSDQEITDLFGENEYLRNTLDKDNTESTEKALLEIYERL
RPGEPPTVDNAKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EIIAEKDTLIDRRTLDRIIPNLESGVGFRKITPSGGVVEEDVTLQSIKIYAPIDSEGEKV
INVISNAYVEENVKNITPADILSSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTSRIDYLTADEEDNYVVAQANARLADDGSFIDEDIVSRFRGEN
TVMSRDRMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGT
GMEYVSGKDSGAAVICKFPGVVEKVEAKNIWVRRYEDVDGVKTKGNLDKYSLLKFIRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMEKGELALGRNVMVAFMTWDGYNYEDAIIMSQR
LVKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDDRGIIRVGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLVRAYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPL
GVPSRMNIGQVLELHLGMAARKLGLHVASPVFDGAREEDVWSTLEEAGMARDAKTVLYDG
RSGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGM
DVKILSSDEKEIEMRDLEDDEEGQQSEGLSLNDQPDDLSSAAMEKEKDAVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgcagaagttatgcacgtatt
agtgaagtgttagaattaccaaatcttattgagattcaaacctcttcctatcagtggttt
cttgatgagggtcttagagaaatgttccaggacatatctcctatcgaagacttcactggt
aacctctcgctagaatttattgattatagtttaggtgatcctaaatattcagtagaggaa
tctaaagagcgcgatgttacctattctgcaccgcttcgtgtgaaggtgcgtttaattaac
aaggaaactggtgaagtaaaagatcaggatgttttcatgggtgatttcccattgatgact
gaaacaggtacatttgtgattaacggtgctgagcgtgttatcgtatcacagctcgtacgt
tcaccaagtgtttattacagcggaaaagtcgataaaaatggtaaaaaaggctttactgca
actgtcattccaaaccgtggcgcttggttagagtacgaaacagatgctaaagatgttgca
tatgtgcgtattgatcgcactcggaaattgccggtaacggttcttttgcgcgcactaggg
tttggctctgatcaagaaatcaccgatcttttcggtgaaaatgaataccttcgcaacaca
cttgataaggacaatacagaaagcacagaaaaagctcttcttgaaatctatgagcgtctg
cgccctggtgagcctccaacagtggataatgcgaagagcttgcttgattcaagattcttt
gatccaaaacgctatgatcttgcaagtgtaggacgctacaagatcaataaaaagcttcat
attaaaaatcgccttttcaaccagcgtcttgcggaaacactggtagaccctgaaactggt
gaaattattgcagaaaaagatactttaattgatagacgcacacttgaccgaatcattcct
aatttagagagtggagtaggcttcagaaaaataacgccatcaggcggagttgttgaagaa
gatgtgacgcttcaatcaattaaaatttatgctcctatcgattcagaaggtgaaaaagtc
attaacgtaatcagcaacgcttatgttgaagagaacgttaaaaatattacgcctgctgac
atcctgtcttcaattagttatttctttaacttgcttcatggagtaggagacacagatgat
atcgaccatttaggaaaccgtcgtctgcgttctgtaggggagcttcttcaaaatcaattc
agaatcggtctttcacgtatggagcgtgttgtacgcgagagaatgtccattcaagataca
aatacaattacacctcagcagctgattaacattcgtcctgttattgcgtcaattaaagag
ttcttcggaagctctcagttatcgcagttcatggatcagacgaatccgcttgctgaatta
actcataaacgccgtctgtctgcacttggacctggtggtttaacacgtgaacgtgctgga
tttgaagtgcgtgacgttcattactctcactatggccgcatgtgtccgatcgaaactcct
gagggaccaaacatcggtttgatcaactctctgtcttcatatgctaaagtcaatcgcttt
ggtttcattgaaacgccgtatcgccgcgtggatcctgaaacagggaaagtaacttcccgc
atcgattacttaacagcagatgaagaggataattatgtagttgcccaagcaaacgctcgt
ttagcagatgatggttcattcattgatgaggacatcgtttcccgtttccgcggtgagaac
acagttatgtcccgtgacagaatggattacatggatgtatctcctaaacaggtagtttct
gcagcaacagcatgtatcccgttcctggaaaatgatgactccaaccgtgcccttatggga
gcgaacatgcagcgacaagcagtacctcttatgaaccctgagtctccgattgtcggaaca
ggcatggagtatgtatcaggcaaagactctggtgctgcagtaatctgtaagttccctgga
gtagttgaaaaagtagaagctaaaaacatctgggtacgacgctacgaagatgtggatggc
gtgaaaacaaaaggcaacttagataagtacagccttcttaaattcattcgttctaaccaa
ggtacctgctacaaccagcgtccgattgtaagtgtcggcgatgaagttgttaaaggtgaa
atccttgcagatggaccttctatggaaaaaggcgaattggcacttggacgcaacgttatg
gttgcattcatgacatgggatggctacaactatgaggatgccatcatcatgagtcagcgt
cttgtaaaagatgatgtttatacttctattcatatcgaagaatatgaatcagaatcacgt
gatacaaagcttggacctgaagaaatcacacgcgatatcccgaatgttggagaagatgcg
cttcgcaacttagacgaccgcggtattatccgtgtcggtgcagaagtaaaagacggagat
ctgcttgttggtaaggttacgccaaaaggggtaactgaactgactgcggaagaacgcctg
cttcatgcgatctttggtgaaaaagcaagggaagtccgtgatacttcacttcgtgttcct
cacggaggcggcggtatcgttctggatgttaaagtgttcaaccgtgaagacggagatgaa
cttccacctggagttaaccagttagtccgtgcatacatcgttcagaagcgtaaaatttct
gaaggggataaaatggccggacgtcacggaaacaaaggtgttatctcaagaattcttcct
gaagaagatatgccgtatcttccagacggcacaccggtggatatcatgttaaatccgctg
ggcgttccatctcgtatgaacatcggtcaggtgcttgaactgcatcttggaatggcagcg
cgcaagcttggcttacacgttgcatctccagtatttgatggtgcccgcgaggaagatgtt
tggtcaactcttgaagaagctggcatggcacgcgatgctaaaacagttctttatgatggc
cgttcaggtgaaccgtttgataaccgtgtatcagtaggtatcatgtacatgattaaactt
gcccacatggttgatgataaattgcatgcacgttcaacaggtccttactcacttgttaca
cagcagcctcttggcggtaaagcccaatttggcggacagcgtttcggagaaatggaagta
tgggcacttgaagcttatggcgcagcttatactcttcaagagattctcacagttaagtcg
gatgatgttgttggccgtgtgaaaacgtacgaagcaatcgtcaaaggcgaaaatgttccg
gagcctggggttccagaatcattcaaagtattaattaaagagcttcaaagcttaggtatg
gatgtcaagattctctcaagcgacgaaaaagaaatcgaaatgagagacttagaagatgat
gaagaaggacagcaatcagaaggtttatccttgaatgatcagccggatgatctttcatca
gcagccatggaaaaagaaaaagacgcagttactaaagaatag
DBGET
integrated database retrieval system
