Metabacillus dongyingensis: K8L98_01320
Help
Entry
K8L98_01320 CDS
T07997
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8L98_01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdg03019
]
K8L98_01320
03009 Ribosome biogenesis [BR:
mdg03009
]
K8L98_01320
Enzymes [BR:
mdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K8L98_01320
Messenger RNA biogenesis [BR:
mdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8L98_01320
Ribosome biogenesis [BR:
mdg03009
]
Prokaryotic type
rRNA helicases
K8L98_01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
UAL52538
LinkDB
All DBs
Position
236773..238260
Genome browser
AA seq
495 aa
AA seq
DB search
MTITFQELGISPLLMEAINKMGFEEATPIQAQTIPLGLQNKDVIGQAQTGTGKTAAFGIP
LIEKIDVKQDKIQGIIIAPTRELAIQVSEELYKIGSAKRARVLPIYGGQDINRQIRSLKK
FPHIIVGTPGRLIDHINRKTLKLSDVQTVVMDEADEMLNMGFIEDIENILSNVPSEHQTL
LFSATMPDPIRRIAEKFMTNPELVKVKAKEMTVANIQQFFIEVQEKKKFDVLTRLLDIQS
PELAIVFGRTKRRVDELSEALMLRGYAAEGIHGDLTQAKRMSALRKFKEGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGAAMTFVTPREQDMLKIIERTT
KRKMDRMKAPTLDEALEGQQSVSIEKIRQTITDENLSFYKRTAEALLEEFDQVSVLAAAI
KLMTKEPNQTPVNLTDEAPMYAKRGGKRSSSSSSNRNRRDGQRPHSKNNKRSYGQQGGKP
NSSNKRRYSNSSSSN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgacaattacgtttcaagaactaggtatcagcccattattaatggaagctattaataaa
atggggtttgaagaagctacacctatccaagcacaaaccattccactggggctgcagaat
aaagatgtgatcggccaagcacaaactggaactggtaaaacagctgcattcggtattccg
cttattgaaaaaatcgatgttaaacaagataagattcaagggatcatcattgcaccgact
cgcgaacttgcgattcaagtatctgaagagctttacaaaatcggatctgctaaacgcgct
cgtgttcttccgatttatggcggacaggatattaaccgccaaattcgctcattgaagaag
tttcctcacattatcgttggtactccaggccgtctaattgaccatatcaaccgtaaaaca
ttgaaattatctgacgttcaaacagttgtaatggacgaagcagatgaaatgctgaacatg
ggcttcattgaagacattgaaaacattctttcaaatgttccttcagagcaccaaacgttg
ctgttctcagctacaatgcctgatccgatcagacgcattgctgagaaattcatgacaaac
cctgagcttgttaaagtaaaagcgaaggaaatgactgttgcaaacattcagcagttcttc
attgaagtacaggaaaagaagaagtttgatgtattaacacgtcttcttgacattcaatca
cctgagcttgcgatcgttttcggacgcacaaagcgcagagttgatgagctttctgaagct
ttaatgcttagaggatatgcagctgagggaattcatggcgacttaactcaagctaaacgt
atgtctgctcttcgcaagtttaaagaaggcgcaattgaagtgcttgttgctacagacgtt
gctgcacgcggactggacatttctggtgtaactcatgtttacaactttgatgttcctcaa
gaccctgaaagctacgttcaccgtatcggccgtacaggccgtgcaggcaaaactggtgct
gcgatgacattcgtaacaccaagagaacaagatatgcttaaaatcattgagcgtacaact
aagcgcaaaatggaccgcatgaaagcaccgactcttgatgaggcgcttgaaggtcagcaa
tctgtttcaatcgaaaaaatccgtcagacaatcactgatgagaatttgtcattctacaag
cgcactgctgaagcattgcttgaagaatttgatcaagtgtcagtacttgctgctgcaatc
aaattaatgacaaaagaaccgaaccaaactccagttaacttaacggatgaggctccaatg
tatgcgaaaagaggcggaaaacgttcttcttcttcttcaagtaaccgcaacagaagagac
ggtcagcgcccgcattcaaagaacaacaaacgttcttacggacaacaaggcggcaagccg
aacagcagcaacaaaagacgttactcaaactcatcttcatctaattaa
DBGET
integrated database retrieval system
