Metabacillus dongyingensis: K8L98_01850
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Entry
K8L98_01850 CDS
T07997
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03420
Nucleotide excision repair
mdg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8L98_01850 (pcrA)
03430 Mismatch repair
K8L98_01850 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_01850 (pcrA)
Enzymes [BR:
mdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8L98_01850 (pcrA)
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8L98_01850 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K8L98_01850 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
UAL52613
LinkDB
All DBs
Position
340769..342979
Genome browser
AA seq
736 aa
AA seq
DB search
MQFLTDQLLNGLNDMQKEAVKATDGPLLIMAGAGSGKTSVLTRRIAYLMVEKGVAPWNIL
AITFTNKAAREMKERIGKLLGPGADDIWISTFHSMCVRILRRDIDRIGISRNFSILDTTD
QLSVIKSILKERNIDPKKFDPRSILGSISGAKNELITPDEFEKTAGGMYEQVASDVYKDY
QKKLLKNQSLDFDDLIMTTIQLFQRVPEVLEFYQRKFQFIHVDEYQDTNKAQYLLVKMLA
SRFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPTASVILLEQNYRSTQRILEAANGVI
KNNMNRKAKNLWTQNDEGQKINYYRADSESVEGQFVAGKINQLVSSEGRKLSDFAILYRT
NAQSRVIEEILLKSNINYTIVGGIKFYDRKEIKDILAYLRLIANPDDDISLARVINTPKR
GVGATSVDKIAQYALDNDLSLFGAIEQIEFAGVSGRVVSAMVDFRELVRNLANMQDYLSV
TELAEEVIEKTGYREMLKTEKTIEAQSRLENIDEFLSVTQNFEKNSEDKSLVAFLTDLAL
VADIDKLDEDEEASKEAVVLMTLHSAKGLEFPVVFLMGVEEGVFPHSRSLMEEAEMEEER
RLAYVGITRAEKELYITNAKMRTLFGRTSMNPESRFISEIPSELLENLNEVKKSAAPFAA
KTRPDRRPQVNRPIAASTGGDEIAWSVGNKAEHKKWGIGTVVSVKGEGEGKELDIAFPSP
VGIKRLLAKFAPIQKV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatttttaacagatcaattattgaatggtttaaacgatatgcagaaagaagcggtc
aaggcaacagatggaccgctcttaataatggccggagcaggaagcggcaagacgagtgtg
ctcacaagaagaattgcttacttaatggttgaaaaaggcgtagcgccatggaacatcctt
gcgattacgtttacaaataaagcggcgcgtgaaatgaaagaaagaatcggaaaactgctt
ggaccaggtgcagatgatatttggatctcgacctttcactccatgtgtgtccgtatctta
agaagagatatcgaccggatcggaatcagcagaaacttctcgattcttgatacgacagac
cagctttctgtcataaaatccattctgaaagaacgcaatatcgatccgaagaagtttgac
ccgcgaagcattttaggcagcatcagcggagcgaaaaatgaactgatcactcctgatgag
ttcgaaaagacagcaggcggcatgtacgagcaggtcgcaagcgatgtttacaaggattat
caaaagaagctgctgaaaaaccagtcgcttgattttgatgatttgatcatgacaacgatt
cagctttttcagcgtgttcctgaagtgcttgagttttaccagcgcaaatttcagtttatc
cacgtggatgagtatcaggatacgaataaagcgcagtacttattggttaaaatgcttgca
tcacgtttccaaaatctatgtgttgtcggtgattccgatcagtctatttatcgctggcgc
ggtgcggatatcgcgaacattctctcctttgagaaggattacccgactgcgagcgtgatt
ttgcttgagcagaattaccgttccacacagcgtatcctggaagcggcaaacggagttatt
aaaaacaacatgaaccgcaaagcgaaaaatctctggacgcaaaatgatgaaggacagaaa
atcaactattaccgcgctgacagtgaatcagtcgaagggcagttcgtagcgggaaaaatc
aatcagcttgtttcttcagaaggtagaaagctatctgattttgcgattctctaccgcacc
aatgcacagtcccgtgttattgaggaaattctgctcaaatcaaatatcaattacaccatt
gtcggcgggattaagttctacgacagaaaagaaattaaagatatccttgcatacttaaga
ttgattgccaatccggatgatgatatcagcttggcgcgtgttattaacacacctaagcgc
ggtgtaggcgccacatcagtcgataagattgctcagtatgcgcttgataatgacttatct
ctgttcggtgcgattgagcaaatcgaatttgcaggcgtaagcgggcgtgtagtcagtgcg
atggtggatttccgagagcttgtccgcaaccttgcgaacatgcaggattacttgtctgtc
actgagcttgctgaagaagtgattgaaaagacaggatatcgcgaaatgctgaaaaccgaa
aaaacaattgaagcacaaagccgtcttgagaatattgatgagttcttatctgttacgcaa
aacttcgagaaaaatagtgaagataaaagcctggtagcctttttaaccgatttggcttta
gttgcggatattgataaattagatgaagatgaggaagcctctaaagaagccgtcgtgcta
atgactcttcactctgcaaaaggactagagtttccggttgtcttcttaatgggtgtcgag
gaaggggtattcccccacagccgttcacttatggaagaagcggaaatggaagaggagaga
cgtcttgcttatgtcggtattacccgcgctgaaaaagagctgtacattacgaatgctaaa
atgagaactcttttcggacgaacaagcatgaatcctgaatcccgtttcatatcagagatt
ccgtctgaactgctggagaatttaaatgaagtgaaaaagagcgctgctccatttgctgcg
aaaacccgtcctgacagacggccacaggtcaacagaccgattgcggcttcaacaggcgga
gacgaaattgcctggtctgtcggcaataaagcggagcataaaaaatggggaatcggcaca
gttgtcagtgtaaaaggcgaaggagaaggcaaagaacttgatattgcattcccgagcccg
gtaggcattaaacgactgcttgccaagtttgctccgattcaaaaagtgtag
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