Metabacillus dongyingensis: K8L98_10940
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Entry
K8L98_10940 CDS
T07997
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mdg
Metabacillus dongyingensis
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdg03032
]
K8L98_10940 (topA)
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_10940 (topA)
Enzymes [BR:
mdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K8L98_10940 (topA)
DNA replication proteins [BR:
mdg03032
]
Prokaryotic type
DNA Topoisomerases
K8L98_10940 (topA)
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K8L98_10940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
CK_II_beta
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UAL54245
LinkDB
All DBs
Position
2201963..2204038
Genome browser
AA seq
691 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPRSQIGVDTEGNYEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDVDVLSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVAVRLIIDREK
EIKAFVPEEYWTIESQFLKDQDLFDGAFFGINGKKAELKTEADVNNVLNKIKGNNFTVTN
VSKKERKRNPAVPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGMDLGKEGTVGLITYMR
TDSTRISETAQQEAFTFIEQKYGKEFTNTAKKAAKKNSNTQDAHEAIRPTSTLKDPASLK
EFLSRDQLRLYKLIWERFVASQMASAVLDTMSVDLNNNDVMFRANGSKIKFPGFMKVYVE
GNDDGVEEKDRMLPDLQNGDVVYSKDIEPAQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVLELIMEFFPEIINVEFTAKMENSLDEIEDGN
VQWVNIIDDFYKDFAKRLEVAENEMEEIEIKDEPAGVDCEECGNPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVPCPKCEKGNIVERKSKKRRIFYGCDQFPECDFLSWDKPIARSC
PKCDNMLVEKKLKKGMQVQCVNCDYKEEQQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttttagtgattgttgaatcgccggcaaaagcgaaaacaatcgaacgatat
ctagggaaaaaatataaggttaaagcttctatggggcatgtccgcgatcttccaagaagt
cagatcggcgtagacactgaggggaattacgaaccgaaatatattactattcggggaaaa
gggccggtccttaaagaattaaaaacagcagcaaaaaaagcaaaaaaagtctatctcgca
gctgacccggatcgcgaaggggaagccattgcctggcacctcgctcatagtcttgacgtt
gacgttctgtcagactgccgagttgttttcaatgagataacaaaggatgccattaaagaa
tcatttaaacatcctcgtcccatcaacatggatttagttgatgctcagcaggcgagacgg
attctggacagattagtcggttacaaaatcagcccgattctctggaaaaaagtaaaaaaa
gggttaagtgcgggacgcgttcagtctgttgctgtccgtttaatcattgaccgcgaaaaa
gaaataaaagcatttgttccggaagaatactggacaatagaaagtcaattcttaaaagac
caagatcttttcgatggtgcattctttgggatcaacggaaaaaaagctgaattaaaaacc
gaagctgatgttaacaacgtgttaaataaaatcaaaggcaacaattttacagtcacaaac
gtttcgaaaaaagaaagaaaacgtaatcctgcagtaccatttacaacatccacacttcag
caggaagcggcacgtaaattaaatttcagagcgaaaaagacaatgatgattgcccagcag
ctatacgaaggaatggaccttggaaaagagggaactgtcggtctgattacgtacatgcgt
acagattctacaagaatttccgaaacagcccagcaagaagcatttactttcattgaacag
aaatatggcaaagaatttacgaatacagccaaaaaggctgcgaagaaaaattcaaatacc
caagatgcccatgaggcgatccgccctacttcaactttgaaggatcccgcatctttaaaa
gaattcttaagccgcgatcagctgcgtttatacaaactgatctgggaacgttttgtagca
agtcaaatggcatcggccgtactcgatacaatgagcgtcgatttaaacaataacgatgtg
atgttcagagcaaatggctccaaaattaaatttccgggatttatgaaagtgtatgtcgaa
ggaaatgatgatggagtggaggagaaggaccgcatgcttcctgatttacaaaatggagat
gtggtttattcaaaagatatagaacctgctcagcatttcactcagccacctccgcgatat
acagaggcaagacttgtgaaaacccttgaagagctgggaataggcagaccgtccacttat
gcacctactcttgatacgattcagaaaagaggatatgttgcccttgataataaacgtttt
attccgactgagcttggtgaaatcgttcttgaattgatcatggaatttttccctgaaatc
ataaatgttgaatttacggctaaaatggaaaacagtcttgatgaaattgaagacggaaat
gtacaatgggtcaatatcattgacgatttctacaaagattttgcaaagcgcctggaagtc
gctgaaaatgaaatggaagaaatcgaaattaaagatgaaccggcaggtgttgactgtgaa
gaatgcggcaacccaatggtgtttaagatggggcgttacggaaaattcatggcttgctcg
aatttccctgattgccgcaatacaaaaccgattgtgaaagaaatcggggttccatgtccg
aaatgtgaaaaaggaaatattgtcgaaagaaaatcaaagaaacgccgcattttctatggc
tgtgatcagtttccagaatgtgacttcctatcatgggataaaccgattgcaagatcatgt
ccgaaatgtgataatatgctagttgagaaaaaacttaaaaagggcatgcaggtacagtgc
gtgaactgtgattataaagaagaacagcaaaagtaa
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